Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1177
         (614 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M94077-1|AAA36181.1|  316|Homo sapiens loricrin protein.               30   7.5  
M61120-1|AAA36180.1|  316|Homo sapiens loricrin protein.               30   7.5  
CR536555-1|CAG38792.1|  316|Homo sapiens LOR protein.                  30   7.5  
BC108290-1|AAI08291.1|  316|Homo sapiens LOR protein protein.          30   7.5  
BC034690-1|AAH34690.1|  316|Homo sapiens LOR protein protein.          30   7.5  
AL161636-5|CAI19560.1|  312|Homo sapiens loricrin protein.             30   7.5  
AF410502-1|AAL10812.1|   80|Homo sapiens immunoglobulin kappa ch...    30   7.5  
AB013076-1|BAA25794.1|  338|Homo sapiens loricrin protein.             30   7.5  
DQ101046-1|AAZ09052.1|  104|Homo sapiens immunoglobulin kappa li...    29   9.9  

>M94077-1|AAA36181.1|  316|Homo sapiens loricrin protein.
          Length = 316

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -2

Query: 457 LKYSGNAFISGGRTSCESARVGTTGCLLQP*SSNAFRFEGWGSRC 323
           +KYSG    SGG + C S+  G +GC     SS      G GS C
Sbjct: 88  VKYSGGGGSSGGGSGCFSSGGGGSGCF----SSGGGGSSGGGSGC 128


>M61120-1|AAA36180.1|  316|Homo sapiens loricrin protein.
          Length = 316

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -2

Query: 457 LKYSGNAFISGGRTSCESARVGTTGCLLQP*SSNAFRFEGWGSRC 323
           +KYSG    SGG + C S+  G +GC     SS      G GS C
Sbjct: 88  VKYSGGGGSSGGGSGCFSSGGGGSGCF----SSGGGGSSGGGSGC 128


>CR536555-1|CAG38792.1|  316|Homo sapiens LOR protein.
          Length = 316

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -2

Query: 457 LKYSGNAFISGGRTSCESARVGTTGCLLQP*SSNAFRFEGWGSRC 323
           +KYSG    SGG + C S+  G +GC     SS      G GS C
Sbjct: 88  VKYSGGGGSSGGGSGCFSSGGGGSGCF----SSGGGGSSGGGSGC 128


>BC108290-1|AAI08291.1|  316|Homo sapiens LOR protein protein.
          Length = 316

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -2

Query: 457 LKYSGNAFISGGRTSCESARVGTTGCLLQP*SSNAFRFEGWGSRC 323
           +KYSG    SGG + C S+  G +GC     SS      G GS C
Sbjct: 88  VKYSGGGGSSGGGSGCFSSGGGGSGCF----SSGGGGSSGGGSGC 128


>BC034690-1|AAH34690.1|  316|Homo sapiens LOR protein protein.
          Length = 316

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -2

Query: 457 LKYSGNAFISGGRTSCESARVGTTGCLLQP*SSNAFRFEGWGSRC 323
           +KYSG    SGG + C S+  G +GC     SS      G GS C
Sbjct: 88  VKYSGGGGSSGGGSGCFSSGGGGSGCF----SSGGGGSSGGGSGC 128


>AL161636-5|CAI19560.1|  312|Homo sapiens loricrin protein.
          Length = 312

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -2

Query: 457 LKYSGNAFISGGRTSCESARVGTTGCLLQP*SSNAFRFEGWGSRC 323
           +KYSG    SGG + C S+  G +GC     SS      G GS C
Sbjct: 88  VKYSGGGGSSGGGSGCFSSGGGGSGCF----SSGGGGSSGGGSGC 128


>AF410502-1|AAL10812.1|   80|Homo sapiens immunoglobulin kappa chain
           variable region protein.
          Length = 80

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 349 RFEGWGSRCNYTETSELISQGGWRIYIVDVHGSSNHLTP 233
           RF G GS  ++T T   +    + +Y    +GSS HL P
Sbjct: 42  RFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPHLRP 80


>AB013076-1|BAA25794.1|  338|Homo sapiens loricrin protein.
          Length = 338

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -2

Query: 457 LKYSGNAFISGGRTSCESARVGTTGCLLQP*SSNAFRFEGWGSRC 323
           +KYSG    SGG + C S+  G +GC     SS      G GS C
Sbjct: 88  VKYSGGGGSSGGGSGCFSSGGGGSGCF----SSGGGGSSGGGSGC 128


>DQ101046-1|AAZ09052.1|  104|Homo sapiens immunoglobulin kappa light
           chain variable region protein.
          Length = 104

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 349 RFEGWGSRCNYTETSELISQGGWRIYIVDVHGSSNHLTPGG 227
           RF G GS  ++T T   +    + +Y    +GSS  LT GG
Sbjct: 57  RFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSRPLTFGG 97


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,736,391
Number of Sequences: 237096
Number of extensions: 1913487
Number of successful extensions: 4133
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4121
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)