Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1176
         (628 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095036-1|AAM11364.1|  335|Drosophila melanogaster LD26647p pro...    31   1.3  
AE014296-2108|AAF49948.1|  335|Drosophila melanogaster CG6906-PA...    31   1.3  
AE014134-1856|AAS64674.1| 1429|Drosophila melanogaster CG33304-P...    30   2.9  

>AY095036-1|AAM11364.1|  335|Drosophila melanogaster LD26647p
           protein.
          Length = 335

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = +2

Query: 26  RLFEYPE--EIVDKS--VVKRAYFVEQNDSLRAGGRSTFTNLITK*DVFFIKYNL*AIMP 193
           R  EYP+    +DK   +   A+F +  D    GG   FTNL+++ D      N+   +P
Sbjct: 152 RNLEYPDFASALDKDHGIAVMAFFFQVGDK-STGGYEGFTNLLSQIDRKGKSVNMTNPLP 210

Query: 194 IITCLSKSAHGYF 232
           +   +SKS   YF
Sbjct: 211 LGEYISKSVESYF 223


>AE014296-2108|AAF49948.1|  335|Drosophila melanogaster CG6906-PA
           protein.
          Length = 335

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = +2

Query: 26  RLFEYPE--EIVDKS--VVKRAYFVEQNDSLRAGGRSTFTNLITK*DVFFIKYNL*AIMP 193
           R  EYP+    +DK   +   A+F +  D    GG   FTNL+++ D      N+   +P
Sbjct: 152 RNLEYPDFASALDKDHGIAVMAFFFQVGDK-STGGYEGFTNLLSQIDRKGKSVNMTNPLP 210

Query: 194 IITCLSKSAHGYF 232
           +   +SKS   YF
Sbjct: 211 LGEYISKSVESYF 223


>AE014134-1856|AAS64674.1| 1429|Drosophila melanogaster CG33304-PA
            protein.
          Length = 1429

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
 Frame = +1

Query: 241  LTLIDFFHHSHSFDNQMNF----ISLLVKHTKYA*VNLPTHF**LFYYSHL*DDFITKSV 408
            ++ +D F +S+ +DN  N     + ++  +T+Y+           +YY H  DD I KSV
Sbjct: 1274 ISFVDMFSNSNGYDNFTNADHHGVDVVSSNTRYSQTQNSQ-----YYYHHHSDDIIRKSV 1328

Query: 409  L*TCLQKSYLK*VLLPS 459
              T  +K+ +  +L P+
Sbjct: 1329 --TFTEKALVSHILYPT 1343


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,161,659
Number of Sequences: 53049
Number of extensions: 421657
Number of successful extensions: 621
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)