Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1175
(609 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W021 Cluster: Mitochondrial 39S ribosomal protein L23... 133 4e-30
UniRef50_UPI00015B5857 Cluster: PREDICTED: similar to CG1320-PA;... 88 2e-16
UniRef50_Q4SDZ2 Cluster: Chromosome 13 SCAF14627, whole genome s... 61 2e-08
UniRef50_Q7ZZB3 Cluster: L23 (Mitochondrial)-related protein; n=... 58 2e-07
UniRef50_UPI0000587FBD Cluster: PREDICTED: similar to mitochondr... 57 3e-07
UniRef50_A7SX23 Cluster: Predicted protein; n=1; Nematostella ve... 53 6e-06
UniRef50_Q16540 Cluster: Mitochondrial 39S ribosomal protein L23... 52 1e-05
UniRef50_Q5DFF9 Cluster: SJCHGC06939 protein; n=1; Schistosoma j... 50 6e-05
UniRef50_Q9GYS9 Cluster: Probable mitochondrial 39S ribosomal pr... 50 6e-05
UniRef50_Q7SA60 Cluster: Putative uncharacterized protein NCU083... 43 0.005
UniRef50_Q2H0M8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.015
UniRef50_Q893M8 Cluster: Conserved protein; n=5; Clostridium|Rep... 36 0.57
UniRef50_Q6GFQ3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.57
UniRef50_A2FGQ9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.0
UniRef50_Q6FK58 Cluster: Candida glabrata strain CBS138 chromoso... 34 3.0
UniRef50_Q94C32 Cluster: AT4g37280/C7A10_80; n=2; Arabidopsis th... 33 4.0
UniRef50_Q5CVF2 Cluster: Zz domain protein; n=2; Cryptosporidium... 33 4.0
UniRef50_Q6FRX8 Cluster: Similar to sp|Q12749 Saccharomyces cere... 33 4.0
UniRef50_Q1MR07 Cluster: Geranylgeranyl pyrophosphate synthase; ... 33 5.3
UniRef50_A5UJJ6 Cluster: Predicted CRISPR-associated protein; n=... 33 5.3
UniRef50_Q9YVT6 Cluster: Putative uncharacterized protein MSV156... 32 9.3
UniRef50_Q8IK59 Cluster: Putative uncharacterized protein; n=4; ... 32 9.3
UniRef50_Q23RH7 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
UniRef50_Q0TZK0 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
UniRef50_Q9ZFB4 Cluster: Spore germination protein XA; n=3; Baci... 32 9.3
>UniRef50_Q9W021 Cluster: Mitochondrial 39S ribosomal protein L23;
n=6; Endopterygota|Rep: Mitochondrial 39S ribosomal
protein L23 - Drosophila melanogaster (Fruit fly)
Length = 150
Score = 133 bits (321), Expect = 4e-30
Identities = 67/148 (45%), Positives = 89/148 (60%)
Frame = +3
Query: 84 MSTRWYPIYQRGNPQLTSIFAEFLDEISTTTSKTTA*HRAFSLFYGND*I*H*KLFRKIY 263
MSTRWYPIYQRGNPQL F ++ T + FS+ KIY
Sbjct: 1 MSTRWYPIYQRGNPQLRVFLPNFWMKLIRPTEEQPPNVVTFSVSMEMTKYDVRNYLEKIY 60
Query: 264 EVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEH 443
++PVVDVRT+I MG+ KKD GY+ K+DDVK+A+VTLP+ +F +PD F + ++ +
Sbjct: 61 KLPVVDVRTRIAMGETKKDQTYGYITKKDDVKLAYVTLPREESFVFPDFFSEKAEKQAKE 120
Query: 444 AKSLDESKKNFIKYIDHNKSRPIYPAGF 527
KSLDESK F +++D NK RP P F
Sbjct: 121 EKSLDESKAGFRRFLDRNKKRPGTPGWF 148
>UniRef50_UPI00015B5857 Cluster: PREDICTED: similar to CG1320-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG1320-PA - Nasonia vitripennis
Length = 153
Score = 87.8 bits (208), Expect = 2e-16
Identities = 54/152 (35%), Positives = 85/152 (55%), Gaps = 4/152 (2%)
Frame = +3
Query: 84 MSTRWYPIYQRGNPQLTSIFAEFLDEISTTTSKTTA*HRA-FSLFYGND*I*H*KLFRKI 260
MSTR YP YQRGNPQL F ++ + + F + KI
Sbjct: 1 MSTRCYPFYQRGNPQLRIFLPNFWMKLVKPAMEPIRKNVVEFHVSMEMTRYDVKNYLEKI 60
Query: 261 YEVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF--EKSINEE 434
Y+VPV+ V T+I +GK +++ + ++K+DDVK+A+V LP+ +F++P++F E+ E+
Sbjct: 61 YKVPVIKVNTRIALGKTRRNELNN-IVKDDDVKIAYVHLPRYESFQFPNMFENEQKKKEK 119
Query: 435 EEHAKSLDESKKNFIKYID-HNKSRPIYPAGF 527
E+ K DE+KK+F I+ K+RP P F
Sbjct: 120 EKEDKVFDETKKSFHDSIEGMQKNRPGIPPWF 151
Score = 78.6 bits (185), Expect = 1e-13
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +1
Query: 103 PFIKEETHNLRVFLPNFWMKLVRPHPKQL-PNIVHFHCSMEMTKYDIKNYLEKFMKYPL 276
PF + LR+FLPNFWMKLV+P + + N+V FH SMEMT+YD+KNYLEK K P+
Sbjct: 7 PFYQRGNPQLRIFLPNFWMKLVKPAMEPIRKNVVEFHVSMEMTRYDVKNYLEKIYKVPV 65
>UniRef50_Q4SDZ2 Cluster: Chromosome 13 SCAF14627, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 13
SCAF14627, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 272
Score = 60.9 bits (141), Expect = 2e-08
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +1
Query: 130 LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKFMKYPL 276
LR+F P +++ LVRP +Q P+ V FH MEMTK D+KNYLEK + P+
Sbjct: 18 LRIFRPKWFLTLVRPGKEQPPDTVQFHIPMEMTKLDVKNYLEKIYEVPV 66
Score = 37.1 bits (82), Expect = 0.33
Identities = 27/91 (29%), Positives = 40/91 (43%)
Frame = +3
Query: 99 YPIYQRGNPQLTSIFAEFLDEISTTTSKTTA*HRAFSLFYGND*I*H*KLFRKIYEVPVV 278
YP++Q GNPQL ++ + + F + + KIYEVPV
Sbjct: 8 YPLHQLGNPQLRIFRPKWFLTLVRPGKEQPPDTVQFHIPMEMTKLDVKNYLEKIYEVPVG 67
Query: 279 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFV 371
VRT+I G KK + + D K+A+V
Sbjct: 68 AVRTRIQFGSNKKRNHLNQRVNQPDYKLAYV 98
>UniRef50_Q7ZZB3 Cluster: L23 (Mitochondrial)-related protein; n=2;
Gallus gallus|Rep: L23 (Mitochondrial)-related protein -
Gallus gallus (Chicken)
Length = 108
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/48 (58%), Positives = 31/48 (64%)
Frame = +1
Query: 130 LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKFMKYP 273
LR+F PNF+M VRP Q + V F SMEMTK DIKNYLEK P
Sbjct: 20 LRIFRPNFFMLAVRPGVPQPEDTVQFRVSMEMTKVDIKNYLEKIYNVP 67
>UniRef50_UPI0000587FBD Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L23; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L23 - Strongylocentrotus purpuratus
Length = 148
Score = 57.2 bits (132), Expect = 3e-07
Identities = 44/148 (29%), Positives = 66/148 (44%)
Frame = +3
Query: 84 MSTRWYPIYQRGNPQLTSIFAEFLDEISTTTSKTTA*HRAFSLFYGND*I*H*KLFRKIY 263
MS YPIY GNPQ F +F ++ F +Y
Sbjct: 1 MSKARYPIYLLGNPQNRVFFTDFCLKLVKNKKPQPPNVVTFECDPQMTKFDVKNYLENVY 60
Query: 264 EVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEH 443
+VPV V T + FK++ V ++D K+A+VTL + TF++PDLF + EE+++
Sbjct: 61 KVPVARVNTSVIYVPFKRNHKNQRVKLKEDYKLAYVTLAEGQTFEFPDLFPDT--EEKKN 118
Query: 444 AKSLDESKKNFIKYIDHNKSRPIYPAGF 527
+ DE K+ K SR P+ F
Sbjct: 119 EEMADELKEKEEKVSKKFVSRGGVPSWF 146
Score = 56.4 bits (130), Expect = 5e-07
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = +1
Query: 133 RVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKFMKYPL 276
RVF +F +KLV+ Q PN+V F C +MTK+D+KNYLE K P+
Sbjct: 17 RVFFTDFCLKLVKNKKPQPPNVVTFECDPQMTKFDVKNYLENVYKVPV 64
>UniRef50_A7SX23 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 139
Score = 52.8 bits (121), Expect = 6e-06
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +1
Query: 109 IKEETHNLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLE 255
+K+ R+FL N++MK+VRP + N+V FH M+M+K D+KNYL+
Sbjct: 7 VKQPRLQSRIFLTNWFMKIVRPGRELESNVVQFHVPMDMSKIDVKNYLK 55
Score = 46.0 bits (104), Expect = 7e-04
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +3
Query: 252 RKIYEVPVVDVRTKINMGKFKKDVVKGYVIKED--DVKVAFVTLPKTMTFKYPDLFEKSI 425
+ IY+V V V T+I GK K ++K+ D KVA+VTL TFK+PDLF K +
Sbjct: 55 KSIYQVDVARVNTRIQQGKTKMIQKGDKLVKKKFPDYKVAYVTLADG-TFKFPDLFPKRV 113
Query: 426 NEEE 437
E+
Sbjct: 114 QAEK 117
>UniRef50_Q16540 Cluster: Mitochondrial 39S ribosomal protein L23;
n=24; Euteleostomi|Rep: Mitochondrial 39S ribosomal
protein L23 - Homo sapiens (Human)
Length = 153
Score = 52.0 bits (119), Expect = 1e-05
Identities = 38/120 (31%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +3
Query: 99 YPIYQRGNPQLTSIFAEFLDEISTTTSKTTA*HRAFSLFYGND*I*H*KLFRKIYEVPVV 278
YP+Y+ G PQL F ++ F + + IY VPV
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 279 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEEHAKSL 455
VRT++ G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 67 AVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
Score = 49.2 bits (112), Expect = 8e-05
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +1
Query: 130 LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKFMKYPL 276
LRVF NF+++LVRP Q + V F MEMT+ D++NYLE P+
Sbjct: 17 LRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPV 65
>UniRef50_Q5DFF9 Cluster: SJCHGC06939 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06939 protein - Schistosoma
japonicum (Blood fluke)
Length = 175
Score = 49.6 bits (113), Expect = 6e-05
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +1
Query: 130 LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKFMKYPL 276
++ FLP FWMK++ P PK P+ V F +MTK D+ YLEK P+
Sbjct: 16 VQCFLPPFWMKMMYPGPKNPPDHVVFKVHPQMTKRDVWQYLEKIYNVPV 64
>UniRef50_Q9GYS9 Cluster: Probable mitochondrial 39S ribosomal
protein L23; n=2; Caenorhabditis|Rep: Probable
mitochondrial 39S ribosomal protein L23 - Caenorhabditis
elegans
Length = 159
Score = 49.6 bits (113), Expect = 6e-05
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = +3
Query: 255 KIYEVPVVDVRTKINMGKF----KKD-VVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEK 419
KIY++PV DVRT++ MG K D K + K++D K+A+V + K F YP +FE
Sbjct: 62 KIYDLPVRDVRTEVQMGDITWNSKLDHQYKKAMWKDEDKKIAYVFMSKGFEFSYPQMFE- 120
Query: 420 SINEEEEHAKSLDESKK 470
++ E+ E K++ + ++
Sbjct: 121 ALEEDLELVKAMKQQEE 137
Score = 39.5 bits (88), Expect = 0.061
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +1
Query: 133 RVFLPNFWMKLVRPHP---KQLP-NIVHFHCSMEMTKYDIKNYLEKFMKYPL 276
RVFLP+FWM +V +LP N V F M+++DI+ YL K P+
Sbjct: 17 RVFLPDFWMAVVESPSVGRNRLPRNCVKFEVDPRMSRHDIREYLTKIYDLPV 68
>UniRef50_Q7SA60 Cluster: Putative uncharacterized protein
NCU08329.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU08329.1 - Neurospora crassa
Length = 228
Score = 43.2 bits (97), Expect = 0.005
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +1
Query: 133 RVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYL 252
++FLPN + VRP PKQ PN+ F +E K D+++YL
Sbjct: 23 QIFLPNHVITFVRPLPKQPPNLATFIVPLEFNKLDLRDYL 62
>UniRef50_Q2H0M8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 195
Score = 41.5 bits (93), Expect = 0.015
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 127 NLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYL 252
N ++FLPN + +RP KQ PN+ F + K+D+++YL
Sbjct: 22 NKQIFLPNHVIAFIRPKDKQPPNLATFVVPLNFNKFDLRDYL 63
>UniRef50_Q893M8 Cluster: Conserved protein; n=5; Clostridium|Rep:
Conserved protein - Clostridium tetani
Length = 477
Score = 36.3 bits (80), Expect = 0.57
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 291 KINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKK 470
++N GKF K V+K K D V F+ L KT F+ L+ K N E + K + ++
Sbjct: 374 ELNQGKFGKLVIKEINTKGDTTTVKFIALGKTPHFQAGSLYIKDENGERINFKDHYDIRR 433
Query: 471 N 473
N
Sbjct: 434 N 434
>UniRef50_Q6GFQ3 Cluster: Putative uncharacterized protein; n=1;
Staphylococcus aureus subsp. aureus MRSA252|Rep:
Putative uncharacterized protein - Staphylococcus aureus
(strain MRSA252)
Length = 455
Score = 36.3 bits (80), Expect = 0.57
Identities = 19/70 (27%), Positives = 37/70 (52%)
Frame = +3
Query: 285 RTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDES 464
R + N K +++ +I DD+K F + + M +KYPDL E + ++E+ +
Sbjct: 111 RGQANDWPMKAGLLRNDII--DDLKKEFENIYEDMAYKYPDLIEYTCLNKKEYKAEDFKK 168
Query: 465 KKNFIKYIDH 494
++N + Y+ H
Sbjct: 169 RENNMAYLQH 178
>UniRef50_A2FGQ9 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 179
Score = 33.9 bits (74), Expect = 3.0
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +3
Query: 261 YEVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEE 440
Y++P+ + + + G +D +K + + LP+T+ +Y D EK I E+
Sbjct: 48 YDIPIAYLSKQASYGPSSEDHLKDKDVYR--YLRSINKLPETLFKEYQDRKEKGIKTSED 105
Query: 441 HAK--SLDESKKNFIKYIDHNKSR 506
+AK ++D +K+ IK + +K+R
Sbjct: 106 YAKPEAVDRLQKDLIKKQEKSKAR 129
>UniRef50_Q6FK58 Cluster: Candida glabrata strain CBS138 chromosome M
complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome M complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1303
Score = 33.9 bits (74), Expect = 3.0
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +3
Query: 276 VDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHA--K 449
+ +++K+ KKD V+ + + +D V V + K + + +P++ +IN E + K
Sbjct: 963 ISMKSKVK-SSMKKDFVRSW--QGNDSMVLLVKIVKVLLYDFPEI--ATINNSEYYVLLK 1017
Query: 450 SLDESKKNFIKYIDHNKSRPIY 515
++ESK +F+ I N PIY
Sbjct: 1018 KMEESKDHFLSMIKDN--IPIY 1037
>UniRef50_Q94C32 Cluster: AT4g37280/C7A10_80; n=2; Arabidopsis
thaliana|Rep: AT4g37280/C7A10_80 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 320
Score = 33.5 bits (73), Expect = 4.0
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +3
Query: 396 KYPDLFEKSINEEEEHAKSLDESKKNFIKYIDHNKSRPIYPAGFXXNRL 542
K PDLF +N EEE + ++ +F+K+I N+S + P+ + +++
Sbjct: 263 KLPDLFSY-VNMEEETWSRMQQTLSDFLKFIQKNQSTFLLPSAYDSDKV 310
>UniRef50_Q5CVF2 Cluster: Zz domain protein; n=2;
Cryptosporidium|Rep: Zz domain protein - Cryptosporidium
parvum Iowa II
Length = 685
Score = 33.5 bits (73), Expect = 4.0
Identities = 16/64 (25%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +3
Query: 312 KKDVVK--GYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKKNFIKY 485
KK + K GY ++D++K AF+ + + +LF ++ ++++ + L+E ++NF +
Sbjct: 166 KKGISKKLGYDKEQDELKKAFLKAAEGLDESEDELFSGTLIKKDKSKEELEEEERNFKSF 225
Query: 486 IDHN 497
+ N
Sbjct: 226 LTRN 229
>UniRef50_Q6FRX8 Cluster: Similar to sp|Q12749 Saccharomyces
cerevisiae YLR383w RHC18; n=1; Candida glabrata|Rep:
Similar to sp|Q12749 Saccharomyces cerevisiae YLR383w
RHC18 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1110
Score = 33.5 bits (73), Expect = 4.0
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +3
Query: 306 KFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKKNFIKY 485
+ KKD+ + Y+ K D+ T+ K + K D + I E++ K + + NF++
Sbjct: 452 ELKKDI-EAYMTKIQDINAKLRTV-KMESLKTIDSIDTQIREKQNEVKDIKHGRTNFLRN 509
Query: 486 IDHN 497
D+N
Sbjct: 510 FDNN 513
>UniRef50_Q1MR07 Cluster: Geranylgeranyl pyrophosphate synthase;
n=1; Lawsonia intracellularis PHE/MN1-00|Rep:
Geranylgeranyl pyrophosphate synthase - Lawsonia
intracellularis (strain PHE/MN1-00)
Length = 324
Score = 33.1 bits (72), Expect = 5.3
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 575 GSIWTNKN*YL*AIXXKTSWVYRSA 501
G IW NKN YL I KT+WV ++A
Sbjct: 152 GEIWENKNIYLEIITGKTAWVIQAA 176
>UniRef50_A5UJJ6 Cluster: Predicted CRISPR-associated protein; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Predicted
CRISPR-associated protein - Methanobrevibacter smithii
(strain PS / ATCC 35061 / DSM 861)
Length = 452
Score = 33.1 bits (72), Expect = 5.3
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2
Query: 191 GSCFGCGRTNFIQKFGKNT 135
GSC GCGR N + FGK+T
Sbjct: 98 GSCIGCGRRNSVNVFGKST 116
>UniRef50_Q9YVT6 Cluster: Putative uncharacterized protein MSV156;
n=1; Melanoplus sanguinipes entomopoxvirus|Rep: Putative
uncharacterized protein MSV156 - Melanoplus sanguinipes
entomopoxvirus (MsEPV)
Length = 1127
Score = 32.3 bits (70), Expect = 9.3
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 381 KTMTFKYPDLFEKSINEEEEHA-KSLDESKKNFIK 482
K + FK D +K IN++++ K LDESKK FIK
Sbjct: 195 KEIEFKNIDNVQKEINKKQDELNKLLDESKKEFIK 229
>UniRef50_Q8IK59 Cluster: Putative uncharacterized protein; n=4;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1971
Score = 32.3 bits (70), Expect = 9.3
Identities = 24/64 (37%), Positives = 34/64 (53%)
Frame = +3
Query: 315 KDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKKNFIKYIDH 494
KD+ K + IKE+D + + L K DL KSI E E+ + SL K +IK+ID
Sbjct: 1123 KDLKKEW-IKEEDKYIDAMDLMKKDEMYEDDLLNKSIVELEK-SVSLKHWKDMYIKWIDE 1180
Query: 495 NKSR 506
+ R
Sbjct: 1181 DNER 1184
>UniRef50_Q23RH7 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 693
Score = 32.3 bits (70), Expect = 9.3
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Frame = +3
Query: 243 KLFRKIYEVPVVDVRTKINMGKFKKDVVKGYVI--KED--DVKVAFVTLPKTMTFKYPDL 410
KL +K E+ +++ R K+ K +K K + K D D ++ + +F+ +
Sbjct: 408 KLDKKDQEIKMLNERIKLIANKKQKYKKKSIDLNTKYDVLDTQIRDLKNKMDQSFQVQEQ 467
Query: 411 FEKSINEEEEHAKSLD----ESKKNFIKYIDHNKSRPIYPAGFXXNRL 542
+++INE H KSL+ +SK N + N P Y G N++
Sbjct: 468 QQQNINERNNHLKSLNDITSQSKVNLTTNVSENNKIPQYGNGQYMNQV 515
>UniRef50_Q0TZK0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 222
Score = 32.3 bits (70), Expect = 9.3
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +1
Query: 133 RVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYL 252
+++LP F + L+R P+ P F ++ +KYD+++YL
Sbjct: 17 KIYLPKFTVALIRT-PRLSPYHARFLVPLDFSKYDLRDYL 55
>UniRef50_Q9ZFB4 Cluster: Spore germination protein XA; n=3;
Bacillus cereus group|Rep: Spore germination protein XA
- Bacillus anthracis
Length = 492
Score = 32.3 bits (70), Expect = 9.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 130 LRVFLPNFWMKLVRPHPKQLP 192
+ +FLP FW+ LV HP Q+P
Sbjct: 293 ISIFLPGFWVALVTYHPDQIP 313
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,465,517
Number of Sequences: 1657284
Number of extensions: 9359302
Number of successful extensions: 23738
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 22980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23724
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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