Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1175
(609 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49254-1|CAA89220.1| 153|Homo sapiens L23-related gene protein. 52 2e-06
U26596-1|AAC50415.1| 153|Homo sapiens ribosomal protein L23-rel... 52 2e-06
BC027710-1|AAH27710.1| 153|Homo sapiens mitochondrial ribosomal... 52 2e-06
CR456352-1|CAG30238.1| 634|Homo sapiens Em:AC005500.4 protein. 31 4.2
BC015923-1|AAH15923.1| 634|Homo sapiens kelch-like 22 (Drosophi... 31 4.2
AK222850-1|BAD96570.1| 634|Homo sapiens kelch-like variant prot... 31 4.2
AK027266-1|BAB55007.1| 525|Homo sapiens protein ( Homo sapiens ... 31 4.2
>Z49254-1|CAA89220.1| 153|Homo sapiens L23-related gene protein.
Length = 153
Score = 52.0 bits (119), Expect = 2e-06
Identities = 38/120 (31%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +3
Query: 99 YPIYQRGNPQLTSIFAEFLDEISTTTSKTTA*HRAFSLFYGND*I*H*KLFRKIYEVPVV 278
YP+Y+ G PQL F ++ F + + IY VPV
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 279 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEEHAKSL 455
VRT++ G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 67 AVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
Score = 49.2 bits (112), Expect = 1e-05
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +1
Query: 130 LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKFMKYPL 276
LRVF NF+++LVRP Q + V F MEMT+ D++NYLE P+
Sbjct: 17 LRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPV 65
>U26596-1|AAC50415.1| 153|Homo sapiens ribosomal protein
L23-related product protein.
Length = 153
Score = 52.0 bits (119), Expect = 2e-06
Identities = 38/120 (31%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +3
Query: 99 YPIYQRGNPQLTSIFAEFLDEISTTTSKTTA*HRAFSLFYGND*I*H*KLFRKIYEVPVV 278
YP+Y+ G PQL F ++ F + + IY VPV
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 279 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEEHAKSL 455
VRT++ G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 67 AVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
Score = 49.2 bits (112), Expect = 1e-05
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +1
Query: 130 LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKFMKYPL 276
LRVF NF+++LVRP Q + V F MEMT+ D++NYLE P+
Sbjct: 17 LRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPV 65
>BC027710-1|AAH27710.1| 153|Homo sapiens mitochondrial ribosomal
protein L23 protein.
Length = 153
Score = 52.0 bits (119), Expect = 2e-06
Identities = 38/120 (31%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +3
Query: 99 YPIYQRGNPQLTSIFAEFLDEISTTTSKTTA*HRAFSLFYGND*I*H*KLFRKIYEVPVV 278
YP+Y+ G PQL F ++ F + + IY VPV
Sbjct: 7 YPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVA 66
Query: 279 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEEHAKSL 455
VRT++ G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 67 AVRTRVQHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
Score = 49.2 bits (112), Expect = 1e-05
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +1
Query: 130 LRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKFMKYPL 276
LRVF NF+++LVRP Q + V F MEMT+ D++NYLE P+
Sbjct: 17 LRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPV 65
>CR456352-1|CAG30238.1| 634|Homo sapiens Em:AC005500.4 protein.
Length = 634
Score = 30.7 bits (66), Expect = 4.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 121 THNLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKF 261
T L + L N LV Q+P I+HF C M+ D +N L+ +
Sbjct: 110 TSELELSLSNVQETLVAACQLQIPEIIHFCCDFLMSWVDEENILDVY 156
>BC015923-1|AAH15923.1| 634|Homo sapiens kelch-like 22 (Drosophila)
protein.
Length = 634
Score = 30.7 bits (66), Expect = 4.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 121 THNLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKF 261
T L + L N LV Q+P I+HF C M+ D +N L+ +
Sbjct: 110 TSELELSLSNVQETLVAACQLQIPEIIHFCCDFLMSWVDEENILDVY 156
>AK222850-1|BAD96570.1| 634|Homo sapiens kelch-like variant
protein.
Length = 634
Score = 30.7 bits (66), Expect = 4.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 121 THNLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKF 261
T L + L N LV Q+P I+HF C M+ D +N L+ +
Sbjct: 110 TSELELSLSNVQETLVAACQLQIPEIIHFCCDFLMSWVDEENILDVY 156
>AK027266-1|BAB55007.1| 525|Homo sapiens protein ( Homo sapiens
cDNA FLJ14360 fis, clone HEMBA1000488, weakly similar to
RING CANAL PROTEIN. ).
Length = 525
Score = 30.7 bits (66), Expect = 4.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 121 THNLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKF 261
T L + L N LV Q+P I+HF C M+ D +N L+ +
Sbjct: 110 TSELELSLSNVQETLVAACQLQIPEIIHFCCDFLMSWVDEENILDVY 156
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,052,425
Number of Sequences: 237096
Number of extensions: 1442528
Number of successful extensions: 2311
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2311
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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