Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1175
         (609 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071415-1|AAL49037.1|  150|Drosophila melanogaster RE49852p pro...   133   2e-31
AE014296-445|AAF47639.1|  150|Drosophila melanogaster CG1320-PA ...   133   2e-31

>AY071415-1|AAL49037.1|  150|Drosophila melanogaster RE49852p
           protein.
          Length = 150

 Score =  133 bits (321), Expect = 2e-31
 Identities = 67/148 (45%), Positives = 89/148 (60%)
 Frame = +3

Query: 84  MSTRWYPIYQRGNPQLTSIFAEFLDEISTTTSKTTA*HRAFSLFYGND*I*H*KLFRKIY 263
           MSTRWYPIYQRGNPQL      F  ++   T +       FS+              KIY
Sbjct: 1   MSTRWYPIYQRGNPQLRVFLPNFWMKLIRPTEEQPPNVVTFSVSMEMTKYDVRNYLEKIY 60

Query: 264 EVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEH 443
           ++PVVDVRT+I MG+ KKD   GY+ K+DDVK+A+VTLP+  +F +PD F +   ++ + 
Sbjct: 61  KLPVVDVRTRIAMGETKKDQTYGYITKKDDVKLAYVTLPREESFVFPDFFSEKAEKQAKE 120

Query: 444 AKSLDESKKNFIKYIDHNKSRPIYPAGF 527
            KSLDESK  F +++D NK RP  P  F
Sbjct: 121 EKSLDESKAGFRRFLDRNKKRPGTPGWF 148


>AE014296-445|AAF47639.1|  150|Drosophila melanogaster CG1320-PA
           protein.
          Length = 150

 Score =  133 bits (321), Expect = 2e-31
 Identities = 67/148 (45%), Positives = 89/148 (60%)
 Frame = +3

Query: 84  MSTRWYPIYQRGNPQLTSIFAEFLDEISTTTSKTTA*HRAFSLFYGND*I*H*KLFRKIY 263
           MSTRWYPIYQRGNPQL      F  ++   T +       FS+              KIY
Sbjct: 1   MSTRWYPIYQRGNPQLRVFLPNFWMKLIRPTEEQPPNVVTFSVSMEMTKYDVRNYLEKIY 60

Query: 264 EVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEH 443
           ++PVVDVRT+I MG+ KKD   GY+ K+DDVK+A+VTLP+  +F +PD F +   ++ + 
Sbjct: 61  KLPVVDVRTRIAMGETKKDQTYGYITKKDDVKLAYVTLPREESFVFPDFFSEKAEKQAKE 120

Query: 444 AKSLDESKKNFIKYIDHNKSRPIYPAGF 527
            KSLDESK  F +++D NK RP  P  F
Sbjct: 121 EKSLDESKAGFRRFLDRNKKRPGTPGWF 148


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,559,450
Number of Sequences: 53049
Number of extensions: 443999
Number of successful extensions: 1196
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)