BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1175 (609 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF000263-4|AAG00016.1| 159|Caenorhabditis elegans Hypothetical ... 50 2e-06 Z81558-3|CAB04541.1| 356|Caenorhabditis elegans Hypothetical pr... 30 1.5 Z73971-12|CAC42267.1| 718|Caenorhabditis elegans Hypothetical p... 30 1.5 Z72515-6|CAA96686.2| 718|Caenorhabditis elegans Hypothetical pr... 30 1.5 AC084197-48|AAY43983.1| 250|Caenorhabditis elegans Hypothetical... 29 2.6 Z81109-5|CAB03251.1| 588|Caenorhabditis elegans Hypothetical pr... 28 6.0 Z47357-3|CAA87422.1| 360|Caenorhabditis elegans Hypothetical pr... 28 6.0 AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 28 6.0 Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical pr... 27 7.9 Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical pr... 27 7.9 U13645-2|AAM15543.1| 367|Caenorhabditis elegans Hypothetical pr... 27 7.9 AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 7.9 AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 7.9 AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 7.9 AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 7.9 >AF000263-4|AAG00016.1| 159|Caenorhabditis elegans Hypothetical protein T08B2.8 protein. Length = 159 Score = 49.6 bits (113), Expect = 2e-06 Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 5/77 (6%) Frame = +3 Query: 255 KIYEVPVVDVRTKINMGKF----KKD-VVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEK 419 KIY++PV DVRT++ MG K D K + K++D K+A+V + K F YP +FE Sbjct: 62 KIYDLPVRDVRTEVQMGDITWNSKLDHQYKKAMWKDEDKKIAYVFMSKGFEFSYPQMFE- 120 Query: 420 SINEEEEHAKSLDESKK 470 ++ E+ E K++ + ++ Sbjct: 121 ALEEDLELVKAMKQQEE 137 Score = 39.5 bits (88), Expect = 0.002 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Frame = +1 Query: 133 RVFLPNFWMKLVRPHP---KQLP-NIVHFHCSMEMTKYDIKNYLEKFMKYPL 276 RVFLP+FWM +V +LP N V F M+++DI+ YL K P+ Sbjct: 17 RVFLPDFWMAVVESPSVGRNRLPRNCVKFEVDPRMSRHDIREYLTKIYDLPV 68 >Z81558-3|CAB04541.1| 356|Caenorhabditis elegans Hypothetical protein F59D12.3 protein. Length = 356 Score = 29.9 bits (64), Expect = 1.5 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +3 Query: 288 TKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSL 455 TKIN+GK K V + K++ K AF ++ F+ + FEK + + +S+ Sbjct: 33 TKINLGKVKTTVEAPFKNKKNRKKSAFPNKQRSRFFQTFNRFEKLLRGNYNYLRSI 88 >Z73971-12|CAC42267.1| 718|Caenorhabditis elegans Hypothetical protein T11A5.6 protein. Length = 718 Score = 29.9 bits (64), Expect = 1.5 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +2 Query: 41 NIVYYPLLNTSNFNNVHTVV 100 N +YPLLNTS+F+ +H+ V Sbjct: 696 NAQHYPLLNTSSFDPIHSTV 715 >Z72515-6|CAA96686.2| 718|Caenorhabditis elegans Hypothetical protein T11A5.6 protein. Length = 718 Score = 29.9 bits (64), Expect = 1.5 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +2 Query: 41 NIVYYPLLNTSNFNNVHTVV 100 N +YPLLNTS+F+ +H+ V Sbjct: 696 NAQHYPLLNTSSFDPIHSTV 715 >AC084197-48|AAY43983.1| 250|Caenorhabditis elegans Hypothetical protein Y73B6BL.44 protein. Length = 250 Score = 29.1 bits (62), Expect = 2.6 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = +3 Query: 312 KKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSL-DESKKNFIKYI 488 +K V+ KE V LP+ K D++EK+INE+ + K D+ KK + + Sbjct: 100 EKSVILRKSRKECKVPSVVQALPEKYQKKISDIWEKNINEKVKKEKDCWDQQKKTRLLLL 159 Query: 489 DHNKSRPIYPAGF 527 + +P F Sbjct: 160 NLPMGVKFHPPAF 172 >Z81109-5|CAB03251.1| 588|Caenorhabditis elegans Hypothetical protein R10D12.8 protein. Length = 588 Score = 27.9 bits (59), Expect = 6.0 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +1 Query: 199 VHFHCSMEMTKYDIKNYLEKFMK 267 +HFHC + TKYD +K K Sbjct: 63 IHFHCLTQNTKYDFFQIFDKSRK 85 >Z47357-3|CAA87422.1| 360|Caenorhabditis elegans Hypothetical protein ZK1128.3 protein. Length = 360 Score = 27.9 bits (59), Expect = 6.0 Identities = 13/55 (23%), Positives = 28/55 (50%) Frame = +3 Query: 306 KFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKK 470 K ++ ++G + V + VT+PK + F+ L ++ + E H DE+++ Sbjct: 47 KNRRQRMEGLENVDQTVDLQLVTVPKVVPFRASRLLQEIYDRERVHGMRRDEARQ 101 >AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical protein C09E7.5 protein. Length = 496 Score = 27.9 bits (59), Expect = 6.0 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 4/66 (6%) Frame = +3 Query: 327 KGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKKNFI----KYIDH 494 K + KED + T KT + E+++ EE+E K DE+ K + + I+H Sbjct: 85 KTAIDKEDTKSCSECTEFKTYMNNMKSVLEETLEEEKEKNKKRDEASKKTLNSKNEEIEH 144 Query: 495 NKSRPI 512 K R I Sbjct: 145 LKKRVI 150 >Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical protein T07F10.1b protein. Length = 976 Score = 27.5 bits (58), Expect = 7.9 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +2 Query: 53 YPLLNTSNFNNVHTVV 100 YPLLN S NN H +V Sbjct: 546 YPLLNASRINNTHIIV 561 >Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical protein T07F10.1a protein. Length = 988 Score = 27.5 bits (58), Expect = 7.9 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +2 Query: 53 YPLLNTSNFNNVHTVV 100 YPLLN S NN H +V Sbjct: 558 YPLLNASRINNTHIIV 573 >U13645-2|AAM15543.1| 367|Caenorhabditis elegans Hypothetical protein C05D10.2c protein. Length = 367 Score = 27.5 bits (58), Expect = 7.9 Identities = 12/37 (32%), Positives = 19/37 (51%) Frame = +3 Query: 402 PDLFEKSINEEEEHAKSLDESKKNFIKYIDHNKSRPI 512 PD + SI++ + + + KK K I H K RP+ Sbjct: 327 PDHIQLSIDDYRDRLYEMIDEKKASFKRIQHEKIRPV 363 >AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C beta protein. Length = 1418 Score = 27.5 bits (58), Expect = 7.9 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 Query: 279 DVRTKINMGKFKKDVVKGYVIKED 350 DV ++NMGKF+ + GY++K D Sbjct: 847 DVYMQLNMGKFEYNGGSGYLLKPD 870 >AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C beta homolog EGL-8 protein. Length = 1431 Score = 27.5 bits (58), Expect = 7.9 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 Query: 279 DVRTKINMGKFKKDVVKGYVIKED 350 DV ++NMGKF+ + GY++K D Sbjct: 848 DVYMQLNMGKFEYNGGSGYLLKPD 871 >AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying defective protein 8,isoform a protein. Length = 1419 Score = 27.5 bits (58), Expect = 7.9 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 Query: 279 DVRTKINMGKFKKDVVKGYVIKED 350 DV ++NMGKF+ + GY++K D Sbjct: 848 DVYMQLNMGKFEYNGGSGYLLKPD 871 >AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying defective protein 8,isoform b protein. Length = 1431 Score = 27.5 bits (58), Expect = 7.9 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 Query: 279 DVRTKINMGKFKKDVVKGYVIKED 350 DV ++NMGKF+ + GY++K D Sbjct: 848 DVYMQLNMGKFEYNGGSGYLLKPD 871 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,867,846 Number of Sequences: 27780 Number of extensions: 236332 Number of successful extensions: 658 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 622 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 657 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1311096392 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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