Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1172
         (604 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   3.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   4.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.1  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 99  PHPRLQRSPCRLLRNPSRGQPGP 167
           PHP L   P  L  +P+   PGP
Sbjct: 232 PHPGLSPHPPHLSSHPAIVTPGP 254


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 99  PHPRLQRSPCRLLRNPSRGQPGP 167
           PHP L   P  L  +P+   PGP
Sbjct: 124 PHPGLSPHPPHLSSHPAIVTPGP 146


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = -2

Query: 468 VVPKNVNAAIATIKTKRTIQFVDLVSNRFQGRYQLPATH 352
           V P N+ A          + F++L++  F G+++    H
Sbjct: 253 VGPDNIKAGYDVPAVSSYLDFINLMAYDFHGKWERETGH 291


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 503 VTWLAVCCTVVTSYPRM 453
           + W  VC  VV  YPR+
Sbjct: 164 LVWREVCTFVVQVYPRL 180


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 532 LVGGLEACVCDLG 570
           L+GG  +C CDLG
Sbjct: 703 LMGGKWSCDCDLG 715


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 483 LYRGDVVPKNVNAAIATIKTKRTIQFV 403
           L+    + KNV  A    K  R +QFV
Sbjct: 84  LFMTSQIKKNVTRAYCNKKIDRNLQFV 110


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 483 LYRGDVVPKNVNAAIATIKTKRTIQFV 403
           L+    + KNV  A    K  R +QFV
Sbjct: 84  LFMTSQIKKNVTRAYCNKKIDRNLQFV 110


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 420 RTIQFVDLVSNRF 382
           +TI+FV ++ NRF
Sbjct: 177 QTIEFVSIIRNRF 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,385
Number of Sequences: 336
Number of extensions: 3552
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)