Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1172
(604 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 185 2e-47
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 185 2e-47
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 185 3e-47
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 177 6e-45
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 73 1e-13
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 73 1e-13
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 73 1e-13
03_01_0034 + 318432-318825,318902-319851 73 2e-13
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 71 7e-13
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 70 1e-12
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 70 2e-12
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 68 5e-12
05_07_0242 + 28615573-28616304 33 0.17
02_05_0443 - 29057427-29057769,29058086-29058147,29070863-29071132 31 0.53
01_06_1014 - 33810112-33811995 31 0.53
09_06_0294 + 22089915-22091333 30 1.6
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 30 1.6
02_05_0762 + 31562589-31563272 30 1.6
02_03_0398 - 18578969-18579140,18579351-18579539,18580032-18581131 29 2.1
10_06_0188 - 11603941-11604528 29 2.8
09_04_0514 - 18236061-18237392 29 2.8
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 29 2.8
12_02_0758 - 22858221-22858367,22859362-22859460,22859505-228595... 29 3.7
11_06_0030 - 19415263-19415388,19415649-19415728,19416196-194162... 29 3.7
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 3.7
01_01_1225 - 9894899-9895333 29 3.7
01_01_0372 - 2900602-2900742,2900817-2901086,2901108-2901197,290... 29 3.7
07_03_0033 + 12656255-12656297,12657402-12657408,12657484-126580... 28 5.0
03_02_0576 - 9587698-9588636 28 5.0
09_04_0501 + 18153252-18153453,18153973-18154224,18154809-181550... 28 6.5
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 28 6.5
03_06_0709 - 35670153-35670350,35671206-35671259,35672444-356725... 28 6.5
08_02_0363 + 16238710-16240224,16240537-16240545 27 8.7
06_01_0500 + 3584743-3585516 27 8.7
05_01_0558 - 4880811-4880996,4881098-4881178,4881247-4881393,488... 27 8.7
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 27 8.7
03_05_0141 - 21210176-21212140 27 8.7
01_06_0923 + 33044283-33044433,33044826-33045242,33046209-330465... 27 8.7
01_01_0424 + 3200223-3200634,3200677-3200836,3200987-3201342,320... 27 8.7
01_01_0020 + 147147-147313,148450-148548,148634-148742,148856-14... 27 8.7
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 185 bits (451), Expect = 2e-47
Identities = 94/153 (61%), Positives = 107/153 (69%), Gaps = 2/153 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITN+ FEP++ M KCDPR YMACC++YRGDVVPK+VNAA+ATIKTKRTIQFVD
Sbjct: 288 VAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWC 347
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P+ G Q + C S +FDLMY+KRAFV
Sbjct: 348 PTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRID--IKFDLMYSKRAFV 405
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 121
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGSE 438
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 185 bits (451), Expect = 2e-47
Identities = 94/153 (61%), Positives = 106/153 (69%), Gaps = 2/153 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V EITNA FEP++ M KCDPR YMACC++YRGDVVPK+VNAA+ATIKTKRT+QFVD
Sbjct: 288 VPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWC 347
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P+ G Q + C S +FDLMYAKRAFV
Sbjct: 348 PTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRID--HKFDLMYAKRAFV 405
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 121
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 185 bits (450), Expect = 3e-47
Identities = 94/154 (61%), Positives = 107/154 (69%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITN+ FEP++ M KCDPR YMACC++YRGDVVPK+VNAA+ATIKTKRTIQFVD
Sbjct: 288 VAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWC 347
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P+ Q + C S +FDLMY+KRAFV
Sbjct: 348 PTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRID--HKFDLMYSKRAFV 405
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG +S
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGAES 439
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 177 bits (431), Expect = 6e-45
Identities = 90/153 (58%), Positives = 104/153 (67%), Gaps = 2/153 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V EITN+ FEPA+ M KCDPR YMACC++YRGDVVPK+VNAA+ +IKT+RT+QFVD
Sbjct: 369 VPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWC 428
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G + + C S +FDLMYAKRAFV
Sbjct: 429 PTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRID--RKFDLMYAKRAFV 486
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 121
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 487 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 519
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V E+T ++ N M DPR Y+ ++RG + K V+ + ++ K + FV+ +
Sbjct: 466 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWI 525
Query: 393 SNRFQGRY-QLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVH 217
N + +P R L ST R + QF M+ ++AF+H
Sbjct: 526 PNNVKSSVCDIPP------RGLSMASTFVGNSTSIQEMFRRVSE---QFTAMFRRKAFLH 576
Query: 216 WYVGEGMEEGEFSEAREDLAALEKDYEE 133
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 577 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 604
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V E+T ++ N M DPR Y+ ++RG + K V+ + ++ K + FV+ +
Sbjct: 307 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWI 366
Query: 393 SNRFQGRY-QLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVH 217
N + +P R L ST R + QF M+ ++AF+H
Sbjct: 367 PNNVKSSVCDIPP------RGLSMASTFIGNSTSIQEMFRRVSE---QFTAMFRRKAFLH 417
Query: 216 WYVGEGMEEGEFSEAREDLAALEKDYEE 133
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 418 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 445
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V E+T ++ N M DPR Y+ ++RG + K V+ + ++ K + FV+ +
Sbjct: 286 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWI 345
Query: 393 SNRFQGRY-QLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVH 217
N + +P R L ST R + QF M+ ++AF+H
Sbjct: 346 PNNVKSSVCDIPP------RGLSMASTFIGNSTSIQEMFRRVSE---QFTAMFRRKAFLH 396
Query: 216 WYVGEGMEEGEFSEAREDLAALEKDYEE 133
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 72.5 bits (170), Expect = 2e-13
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V E+T ++ N M DPR Y+ ++RG + K V+ + ++ K + FV+ +
Sbjct: 286 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWI 345
Query: 393 SNRFQGRY-QLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVH 217
N + +P T L ST R + QF M+ ++AF+H
Sbjct: 346 PNNVKSTVCDIPPTG------LKMASTFIGNSTSIQEMFRRVSE---QFTAMFRRKAFLH 396
Query: 216 WYVGEGMEEGEFSEAREDLAALEKDYEE 133
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 70.9 bits (166), Expect = 7e-13
Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V E+T ++ N M DPR Y+ ++RG + K V+ + ++ K + FV+ +
Sbjct: 286 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWI 345
Query: 393 SNRFQGRY-QLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVH 217
N + +P R L +T R + QF M+ ++AF+H
Sbjct: 346 PNNVKSSVCDIPP------RGLKMAATFVGNSTSIQEMFRRVSE---QFTAMFRRKAFLH 396
Query: 216 WYVGEGMEEGEFSEAREDLAALEKDYEE 133
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 70.1 bits (164), Expect = 1e-12
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V E+T ++ N M DPR Y+ ++RG + K V+ + ++ K + FV+ +
Sbjct: 286 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWI 345
Query: 393 SNRFQGRY-QLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVH 217
N + +P L ST R + QF M+ ++AF+H
Sbjct: 346 PNNVKSSVCDIPPNG------LKMASTFIGNSTSIQEMFRRVSE---QFTAMFRRKAFLH 396
Query: 216 WYVGEGMEEGEFSEAREDLAALEKDYEE 133
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 69.7 bits (163), Expect = 2e-12
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V E+T ++ N M DPR Y+ ++RG + K V+ + ++ K + FV+ +
Sbjct: 286 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWI 345
Query: 393 SNRFQGRY-QLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVH 217
N + +P L ST R + QF M+ ++AF+H
Sbjct: 346 PNNVKSSVCDIPPIG------LKMASTFIGNSTSIQEMFRRVSE---QFTAMFRRKAFLH 396
Query: 216 WYVGEGMEEGEFSEAREDLAALEKDYEE 133
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 68.1 bits (159), Expect = 5e-12
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V E+T ++ N M DPR Y+ ++RG + K V+ + ++ K + FV+ +
Sbjct: 302 VPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWI 361
Query: 393 SNRFQGRY-QLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVH 217
N + +P L ST R + QF M+ ++AF+H
Sbjct: 362 PNNVKSSVCDIPPVG------LSMASTFVGNSTSIQEMFRRVSE---QFTAMFRRKAFLH 412
Query: 216 WYVGEGMEEGEFSEAREDLAALEKDYEE 133
WY EGM+E EF+EA ++ L +Y++
Sbjct: 413 WYTSEGMDEMEFTEAESNMNDLVAEYQQ 440
>05_07_0242 + 28615573-28616304
Length = 243
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +3
Query: 90 LRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRTVVKAS 269
L +P P R P LL P + QP PH L PP+P+ T + T + +
Sbjct: 91 LLIPSPPTPRVP--LLMPPPQPQPHPHPQHPYLHPPFPYHHTPSGSGGTTTESSSEERGP 148
Query: 270 PS 275
PS
Sbjct: 149 PS 150
>02_05_0443 - 29057427-29057769,29058086-29058147,29070863-29071132
Length = 224
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 443 PSLPSKPSVLSNSSTWCPTGFKV-GINYQPPTVVPGGDLAKVQRAVCMLSNTTA 285
P LP P V++ ST C T V + PP VPGG++ ++ A C T A
Sbjct: 24 PPLPLPP-VMAPLSTVCVTEAGVIDLETMPPVGVPGGEVIDLESAECRSGATMA 76
>01_06_1014 - 33810112-33811995
Length = 627
Score = 31.5 bits (68), Expect = 0.53
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 237 AKRAFVHWYVGEGMEEGEFSEAREDL 160
+KRA +HW++GEG+ ++ ED+
Sbjct: 187 SKRAMIHWWIGEGLVAATRNQTAEDV 212
>09_06_0294 + 22089915-22091333
Length = 472
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 562 HKRMLRARQPDGEMRPPSGKL 500
HKR+ R+ + +GE RPP G+L
Sbjct: 8 HKRLRRSSESNGERRPPRGEL 28
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 99 PHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARK 227
P PR + P R + +P P RRT P P H T +R+
Sbjct: 265 PSPRRRSPPSRRVESPRCRPDSPPIRRRTAPSPIRHGGTPSRR 307
>02_05_0762 + 31562589-31563272
Length = 227
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 162 GPHGLRRTLPPPYPHRRTSARKHAWRT*GRTVVKASPS 275
G G+ R LPPP P R + R+ + GR VV +P+
Sbjct: 79 GRRGMMRRLPPPLPSLRGAMRRTCTKD-GRLVVTEAPA 115
>02_03_0398 - 18578969-18579140,18579351-18579539,18580032-18581131
Length = 486
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 346 TTVGGW*LIPTLKPVGHQVDELDSTLGFDGSDGRV 450
T +G W L+P + GH VD+LD+ +G D DGR+
Sbjct: 230 TPLGDW-LLP-FQGQGHYVDDLDAWVGLD-DDGRL 261
>10_06_0188 - 11603941-11604528
Length = 195
Score = 29.1 bits (62), Expect = 2.8
Identities = 27/99 (27%), Positives = 36/99 (36%)
Frame = -3
Query: 395 CPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHSSTSCTPSVLSCT 216
C F P +VPG D+ A L A A+ WA +++ TPS T
Sbjct: 44 CRRAFSAAELPAAPPIVPGTDMYFCTWAFFPLGPPAAAADGWAPFTPFNSAPTPSPPPAT 103
Query: 215 GTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVR 99
+ +P P R P+ R K LK R R
Sbjct: 104 AAA-------PAPAPARAGGPTSR---KKMCVSLKGRAR 132
>09_04_0514 - 18236061-18237392
Length = 443
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +1
Query: 400 VDELDSTLGFDGSDGRVHILGYDVTTVQHTASHVTCLTGVAF--HHLVGGLEACVCDLGD 573
+D L + L GSDGRVH+ + ++ H + T A + G + V D
Sbjct: 254 LDHLAARLFAGGSDGRVHVASLSPAAITSSSWHASGNTNAALVGVGMANGSKNLVTCTED 313
Query: 574 GKAGSW 591
G+ W
Sbjct: 314 GEVSVW 319
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 159 PGPHGLRRTLPPPYPHRRTSARKH 230
P H LR + PPP+PH R H
Sbjct: 19 PSAHLLRLSRPPPFPHLRRRCAPH 42
>12_02_0758 -
22858221-22858367,22859362-22859460,22859505-22859557,
22859674-22859728,22860204-22860284,22860779-22861213
Length = 289
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/80 (32%), Positives = 29/80 (36%), Gaps = 8/80 (10%)
Frame = -3
Query: 581 AFPSPRSQTHASSPPTRW*NATPVRQVTWLAVCCTVVTSYPRM*TRP----SLP----SK 426
A P PR Q P +TP+ L C TS P + P SLP S
Sbjct: 47 ASPVPRFQNPNLQAPAAHYTSTPLTSCHTLPAACNGTTS-PVLSAPPGGRTSLPCATISS 105
Query: 425 PSVLSNSSTWCPTGFKVGIN 366
P LS TW P V N
Sbjct: 106 PQALSRKETWTPYLLAVATN 125
>11_06_0030 -
19415263-19415388,19415649-19415728,19416196-19416232,
19416338-19416460,19417195-19417242,19417335-19417378,
19417461-19417506,19417581-19417623,19418329-19418422,
19418503-19418604,19419936-19420014,19420698-19420964
Length = 362
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 433 GSDGRVHILGYDVTTVQHTASHVTCLTGVAFHHLVGGL--EACVCDLG 570
G + ILG+ +TT ++T + L GV + G+ AC+ + G
Sbjct: 166 GHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKG 213
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 93 RLPHPRLQRSPCRLLRNPS-RGQPGPHGLRRTLPPPYPHRRTSARKHAWR 239
R P+P L PC L PS G G G PPP PH R + + A+R
Sbjct: 15 RSPNPNLNL-PCPLPPIPSCGGGGGGAGPTPPPPPPPPHHRRARSEVAFR 63
>01_01_1225 - 9894899-9895333
Length = 144
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 587 EPAFPSPRSQTHASSPP---TRW*NATPVRQVTWLAVCCTVVTSYPRM*TRPSLPSKP 423
E +PR + A+ P TRW + +P+R++ W +V VV ++ R PS P
Sbjct: 16 EEPLEAPRLGSGAAKPQPEATRWRSQSPMRRLVW-SVTVVVVAAHRRHRRHRRSPSPP 72
>01_01_0372 -
2900602-2900742,2900817-2901086,2901108-2901197,
2902557-2902619
Length = 187
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -3
Query: 485 CCTVVTSYPRM*TRPSLPSKPSVLSNSSTWCPTGFKVGINYQPPTVVPG 339
CC V++ P+ + SLP K ++S+++ TG +V P+ + G
Sbjct: 45 CCNYVSTLPQCSGKMSLPVKHVMVSSTTIAGSTGGEVPATASAPSAIAG 93
>07_03_0033 +
12656255-12656297,12657402-12657408,12657484-12658016,
12658106-12658224,12658329-12658688,12659602-12659784
Length = 414
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = -3
Query: 233 SVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVREPKSTKPMKYLL 63
S+ GT V V R+ S + PS ++ + + +PL A ++EPK T+ + + L
Sbjct: 357 SMAGSAGTGVNVGRQRSP----QVTAPSPQVHEPPSISPLCAAIQEPKYTRDLLHAL 409
>03_02_0576 - 9587698-9588636
Length = 312
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 599 RPYHEPAFPSPRSQTHASSPPTR 531
RP PAFP+ RS + AS PP +
Sbjct: 242 RPPPPPAFPTRRSSSAASDPPLK 264
>09_04_0501 +
18153252-18153453,18153973-18154224,18154809-18155015,
18155198-18157046,18157334-18157381,18158222-18158291,
18158380-18158475,18158583-18158621,18158714-18158924,
18159037-18159178,18159275-18159407,18159762-18159878
Length = 1121
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 111 LQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWR 239
L R+ CR+ +P +P H L +P P+PH +A + A+R
Sbjct: 285 LLRAACRVRASPCL-RPLAHHLLDHIPRPHPHLLHAAARLAYR 326
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/57 (22%), Positives = 28/57 (49%)
Frame = -2
Query: 510 QASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLVSNRFQGRYQLPATHRGAR 340
QA Y++ + +G+V P V+ ++ I+ ++ + F++ Q + A H R
Sbjct: 316 QAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVSGLMLANHTSIR 372
>03_06_0709 -
35670153-35670350,35671206-35671259,35672444-35672527,
35672688-35672902,35673959-35674058,35674178-35674276
Length = 249
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 109 AFSGVHADFFVILLEGSQVLTG 174
+F G ADFF +LL G+ VLTG
Sbjct: 88 SFRGRTADFFYMLLFGATVLTG 109
>08_02_0363 + 16238710-16240224,16240537-16240545
Length = 507
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 425 PSVLSNSSTWCPTGFKVGINYQPPTVVP 342
PS+ + TWC G +G+ P ++P
Sbjct: 356 PSLYVDGETWCMLGNLIGLEQSNPDMIP 383
>06_01_0500 + 3584743-3585516
Length = 257
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 147 SRGQPGPHGLRRTLPPPYPHRRTSA 221
S+ P P +R PPP PHRR A
Sbjct: 9 SKKMPTPAVMRIRSPPPDPHRRARA 33
>05_01_0558 -
4880811-4880996,4881098-4881178,4881247-4881393,
4881985-4882029,4882370-4883134
Length = 407
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +3
Query: 123 PCRLL--RNPSRGQP--GPHGLRR-TLPPPYPHRRTSARKHAWRT*GRTVVKA 266
P R L RNPS P PH L + PPP PHR T R H+ + RT A
Sbjct: 19 PARRLPRRNPSLPFPLRPPHRLSPFSAPPPEPHRLT-YRTHSTSSSSRTPTAA 70
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 99 PHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHR 209
P P S R PS P P + PPP PHR
Sbjct: 21 PKPFKPLSSAAPFRRPSPPPPPPSPVPSPAPPPPPHR 57
>03_05_0141 - 21210176-21212140
Length = 654
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +3
Query: 90 LRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRTVVKAS 269
L LP P PC R+P P T PP HRRT++ + R ++
Sbjct: 3 LLLPPPPTPTPPCAS-RDPLHAAPRRSRSPSTSRPPSRHRRTASARSTLPAAARDLLADD 61
Query: 270 PS 275
P+
Sbjct: 62 PT 63
>01_06_0923 +
33044283-33044433,33044826-33045242,33046209-33046538,
33046806-33046876,33047283-33047357,33047435-33047578,
33047645-33047816,33047933-33048616,33048711-33048767,
33048850-33048956,33049485-33049610,33050221-33050295,
33050387-33050499,33050789-33050905,33051384-33051444,
33051690-33051763,33052267-33052388,33052472-33052620,
33053525-33053635,33053946-33054008,33054689-33054722,
33055253-33055375,33055971-33056033,33056130-33056196,
33056311-33056356,33056446-33056552,33056923-33056971,
33057208-33057273,33057544-33057630
Length = 1286
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 362 QPPTVVPGGDLAKVQRAVCM-LSNTTAIAEAWARLDHSSTSCTPSVLSC 219
+PP K R V + L T ++ E W + + ++ C+P SC
Sbjct: 684 EPPCSTTETTKVKYVRGVAVPLGKTKSLVERWEKREATNVECSPPTGSC 732
>01_01_0424 +
3200223-3200634,3200677-3200836,3200987-3201342,
3201958-3203252
Length = 740
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 483 LYRGDVVPKNVNAAIATIKTKRTIQFVDLVSNRFQG 376
+Y+ ++V +AIA K RT F+D+ +N F G
Sbjct: 547 VYQVNIVLTYKGSAIAISKILRTFVFIDVSNNAFHG 582
>01_01_0020 +
147147-147313,148450-148548,148634-148742,148856-148927,
149056-149061,150811-150915,151048-151539,151629-152025,
152178-153646,154010-154450,154543-155214
Length = 1342
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 257 HSSTSCTPSVLSCTGTSVRVWRRESS 180
H+S PS++ C T ++ WRRE+S
Sbjct: 570 HNSGLYKPSIVVCPVTLLQQWRREAS 595
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,535,400
Number of Sequences: 37544
Number of extensions: 445376
Number of successful extensions: 1909
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1898
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -