Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1172
         (604 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   3.3  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    24   4.4  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   4.4  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    24   4.4  
AY331407-1|AAQ97588.1|  101|Anopheles gambiae agCP14332 protein.       23   5.8  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   7.6  
AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative apyrase/n...    23   7.6  
AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5' nucleo...    23   7.6  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   7.6  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 150 RGQPGPHGLRRTLPPPYP 203
           RG+PGP G    L PP P
Sbjct: 627 RGEPGPKGEPGLLGPPGP 644


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 194 RRESSPKPVRTWLPSRRITKKSAWTPLKARV 102
           R   S K V+ W  +RR+ +K    P  A +
Sbjct: 232 RLRLSEKQVKIWFQNRRVKRKKGDAPFGAEL 262


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +1

Query: 448 VHILGYDVTTVQHTASHV 501
           +H + Y ++TV HTAS++
Sbjct: 733 IHTIEYVLSTVSHTASYL 750


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 460 QECERGHRYHQNQAYYPIRRLGVQPV 383
           QEC +  + HQ Q  + +RR  V  V
Sbjct: 176 QECLQPEQQHQRQQQHTVRRHNVDKV 201


>AY331407-1|AAQ97588.1|  101|Anopheles gambiae agCP14332 protein.
          Length = 101

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 269 ARLDHSSTSCTPSVLSCTGTSVRVWRRE 186
           A+ D    +   SV+ C GT+   W R+
Sbjct: 72  AQTDDDDDAAAASVMWCKGTNTEEWGRK 99


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 207 GEGMEEGEFSEAREDLAALEKDYEE 133
           G+G  E E   A EDL   +K  EE
Sbjct: 781 GKGHRERELKSAEEDLKRSKKKSEE 805


>AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 566

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 228 AFVHWYVGEGMEEGEFSEA 172
           AFV +YVG G  E E++ A
Sbjct: 387 AFVDYYVGRGEAEHEWTYA 405


>AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 566

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 228 AFVHWYVGEGMEEGEFSEA 172
           AFV +YVG G  E E++ A
Sbjct: 387 AFVDYYVGRGEAEHEWTYA 405


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -1

Query: 604 EKGLTMNQLSRRRDHKRMLRARQPDGEMRPP 512
           E+ L + ++ R+   KR  + +QPDG+ R P
Sbjct: 424 ERRLELREVGRKEAKKRG-KQQQPDGKWRFP 453


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,058
Number of Sequences: 2352
Number of extensions: 14703
Number of successful extensions: 53
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)