Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1172
(604 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 190 7e-49
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 190 9e-49
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 188 3e-48
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 188 3e-48
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 188 3e-48
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 188 3e-48
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 187 5e-48
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 187 5e-48
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 186 1e-47
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 186 1e-47
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 182 1e-46
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 182 1e-46
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 177 4e-45
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 177 4e-45
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 173 6e-44
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 163 9e-41
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 97 1e-20
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 83 2e-16
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 83 2e-16
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 77 1e-14
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 39 0.003
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 39 0.003
Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 1.9
U21324-10|AAM22045.1| 102|Caenorhabditis elegans Hypothetical p... 29 2.6
U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine rec... 29 3.4
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 28 4.5
AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical ... 28 4.5
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 28 5.9
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 28 5.9
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 7.8
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 27 7.8
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 190 bits (463), Expect = 7e-49
Identities = 97/154 (62%), Positives = 109/154 (70%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEIT CFEP QMVKCDPR+ YMACC+LYRGDVVPK+VNAAIA++KTKR+IQFVD
Sbjct: 293 VAEITQQCFEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWC 352
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P GA Q + C + +FDLMYAKRAFV
Sbjct: 353 PTGFKVGINYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 410
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG+D+
Sbjct: 411 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDA 444
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 190 bits (462), Expect = 9e-49
Identities = 95/154 (61%), Positives = 107/154 (69%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V+EITN CFEP +QMVKCDPR YMACC+LYRGDVVPK +N+AI+TIKTKR IQFVD
Sbjct: 288 VSEITNVCFEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWC 347
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q + C + +FDLMYAKRAFV
Sbjct: 348 PTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWARLD--HKFDLMYAKRAFV 405
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEARED+AALEKDYEEVG+DS
Sbjct: 406 HWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDS 439
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 188 bits (458), Expect = 3e-48
Identities = 98/154 (63%), Positives = 107/154 (69%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITN CFEP NQMVKCDPR YMA C+L+RGDVVPK+VNAAIATIKTKR+IQFVD
Sbjct: 288 VAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWC 347
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G + C + +FDLMYAKRAFV
Sbjct: 348 PTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 405
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
Score = 108 bits (259), Expect = 3e-24
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = -3
Query: 398 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 255
WCPTGFKVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLDH
Sbjct: 346 WCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDH 393
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 188 bits (458), Expect = 3e-48
Identities = 98/154 (63%), Positives = 107/154 (69%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITN CFEP NQMVKCDPR YMA C+L+RGDVVPK+VNAAIATIKTKR+IQFVD
Sbjct: 287 VAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWC 346
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G + C + +FDLMYAKRAFV
Sbjct: 347 PTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 404
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 405 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 438
Score = 108 bits (259), Expect = 3e-24
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = -3
Query: 398 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 255
WCPTGFKVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLDH
Sbjct: 345 WCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDH 392
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 188 bits (458), Expect = 3e-48
Identities = 98/154 (63%), Positives = 107/154 (69%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITN CFEP NQMVKCDPR YMA C+L+RGDVVPK+VNAAIATIKTKR+IQFVD
Sbjct: 288 VAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWC 347
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G + C + +FDLMYAKRAFV
Sbjct: 348 PTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 405
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
Score = 108 bits (259), Expect = 3e-24
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = -3
Query: 398 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 255
WCPTGFKVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLDH
Sbjct: 346 WCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDH 393
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 188 bits (458), Expect = 3e-48
Identities = 98/154 (63%), Positives = 107/154 (69%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITN CFEP NQMVKCDPR YMA C+L+RGDVVPK+VNAAIATIKTKR+IQFVD
Sbjct: 288 VAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWC 347
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G + C + +FDLMYAKRAFV
Sbjct: 348 PTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 405
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
Score = 108 bits (259), Expect = 3e-24
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = -3
Query: 398 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 255
WCPTGFKVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAWARLDH
Sbjct: 346 WCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDH 393
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 187 bits (456), Expect = 5e-48
Identities = 97/154 (62%), Positives = 106/154 (68%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V++ITN+CFEPANQMVKCDPR YMA C+LYRGDVVPK+VN AIA IKTKRTIQFVD
Sbjct: 286 VSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWC 345
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G + C S +FDLMYAKRAFV
Sbjct: 346 PTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLD--YKFDLMYAKRAFV 403
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 404 HWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 187 bits (456), Expect = 5e-48
Identities = 97/154 (62%), Positives = 106/154 (68%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V++ITN+CFEPANQMVKCDPR YMA C+LYRGDVVPK+VN AIA IKTKRTIQFVD
Sbjct: 286 VSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWC 345
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G + C S +FDLMYAKRAFV
Sbjct: 346 PTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLD--YKFDLMYAKRAFV 403
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 404 HWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 186 bits (453), Expect = 1e-47
Identities = 97/154 (62%), Positives = 105/154 (68%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V +ITN+CFEPANQMVKCDPR YMA C+LYRGDVVPK+VN AIA IKTKRTIQFVD
Sbjct: 286 VNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWC 345
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G + C S +FDLMYAKRAFV
Sbjct: 346 PTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLD--YKFDLMYAKRAFV 403
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 404 HWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 186 bits (453), Expect = 1e-47
Identities = 97/154 (62%), Positives = 105/154 (68%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V +ITN+CFEPANQMVKCDPR YMA C+LYRGDVVPK+VN AIA IKTKRTIQFVD
Sbjct: 286 VNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWC 345
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G + C S +FDLMYAKRAFV
Sbjct: 346 PTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLD--YKFDLMYAKRAFV 403
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 404 HWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 182 bits (444), Expect = 1e-46
Identities = 94/154 (61%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V +ITN+CFEPANQMVKCDPR YMA C+LYRGDVVPK+VN AI IKTKR++QFVD
Sbjct: 286 VNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWC 345
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G + C S +FDLMYAKRAFV
Sbjct: 346 PTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLD--YKFDLMYAKRAFV 403
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 404 HWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
Score = 104 bits (250), Expect = 4e-23
Identities = 45/48 (93%), Positives = 47/48 (97%)
Frame = -3
Query: 398 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 255
WCPTGFKVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAW+RLD+
Sbjct: 344 WCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDY 391
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 182 bits (444), Expect = 1e-46
Identities = 94/154 (61%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V +ITN+CFEPANQMVKCDPR YMA C+LYRGDVVPK+VN AI IKTKR++QFVD
Sbjct: 286 VNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWC 345
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G + C S +FDLMYAKRAFV
Sbjct: 346 PTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLD--YKFDLMYAKRAFV 403
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 404 HWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
Score = 104 bits (250), Expect = 4e-23
Identities = 45/48 (93%), Positives = 47/48 (97%)
Frame = -3
Query: 398 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 255
WCPTGFKVGINYQPPTVVPGGDLAKV RAVCMLSNTTAIAEAW+RLD+
Sbjct: 344 WCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDY 391
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 177 bits (432), Expect = 4e-45
Identities = 88/153 (57%), Positives = 107/153 (69%), Gaps = 2/153 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V+++T+ACFEP QMVKCDPR+ YMA C+LYRGDVVPK++N+AIA +KTKRT+QFV+
Sbjct: 294 VSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWC 353
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G LG+ + + +FDLMYAKRAFV
Sbjct: 354 PTGFKVGINYQPPTVVPGG--DLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFV 411
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 121
HWYVGEGMEEGEFSEARED+AALEKDYEE+G D
Sbjct: 412 HWYVGEGMEEGEFSEAREDMAALEKDYEEIGED 444
Score = 102 bits (244), Expect = 2e-22
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = -3
Query: 398 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 255
WCPTGFKVGINYQPPTVVPGGDL K R+VCM+SNTTAIAEAWARLDH
Sbjct: 352 WCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDH 399
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 177 bits (432), Expect = 4e-45
Identities = 88/153 (57%), Positives = 107/153 (69%), Gaps = 2/153 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V+++T+ACFEP QMVKCDPR+ YMA C+LYRGDVVPK++N+AIA +KTKRT+QFV+
Sbjct: 266 VSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWC 325
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G LG+ + + +FDLMYAKRAFV
Sbjct: 326 PTGFKVGINYQPPTVVPGG--DLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFV 383
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 121
HWYVGEGMEEGEFSEARED+AALEKDYEE+G D
Sbjct: 384 HWYVGEGMEEGEFSEAREDMAALEKDYEEIGED 416
Score = 102 bits (244), Expect = 2e-22
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = -3
Query: 398 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 255
WCPTGFKVGINYQPPTVVPGGDL K R+VCM+SNTTAIAEAWARLDH
Sbjct: 324 WCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDH 371
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 173 bits (422), Expect = 6e-44
Identities = 90/154 (58%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V EIT +CFE +NQMVKCDP+ YMA C+LYRGDVVPK+V+AAI +IKT+R++QFVD
Sbjct: 283 VDEITKSCFEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDWC 342
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G + C +FDLMYAKRAFV
Sbjct: 343 PTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDY--KFDLMYAKRAFV 400
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG DS
Sbjct: 401 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS 434
Score = 101 bits (243), Expect = 3e-22
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = -3
Query: 398 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 255
WCPTGFKVG+NYQPPTV+PGGD+AKV RAVCMLSNTTAIAEAW RLD+
Sbjct: 341 WCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDY 388
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 163 bits (396), Expect = 9e-41
Identities = 84/154 (54%), Positives = 99/154 (64%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V +IT+ CFE ANQMVKCDP YMA C+LYRGDVVPK+VNAAI+++K KR I FVD
Sbjct: 291 VQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWC 350
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P T G + C + +FDLMY+KRAFV
Sbjct: 351 PTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLD--HKFDLMYSKRAFV 408
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HW+VGEGMEEGEF EAR+DLAALEKDY EV D+
Sbjct: 409 HWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDT 442
Score = 98.7 bits (235), Expect = 3e-21
Identities = 44/52 (84%), Positives = 44/52 (84%)
Frame = -3
Query: 410 NSSTWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 255
N WCPTGFKVGINYQ P V GGDLAKV RAVCMLSNTTAIAEAWARLDH
Sbjct: 345 NFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDH 396
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/46 (93%), Positives = 45/46 (97%)
Frame = -2
Query: 255 QFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
+FDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS
Sbjct: 29 KFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 74
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = -3
Query: 311 VCMLSNTTAIAEAWARLDH 255
VCMLS+TTAIAEAW+RLD+
Sbjct: 10 VCMLSDTTAIAEAWSRLDY 28
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 82.6 bits (195), Expect = 2e-16
Identities = 45/147 (30%), Positives = 71/147 (48%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V E+T CF+ N M CDPR Y+ ++RG + K V+ + I+ K + FVD +
Sbjct: 286 VPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWI 345
Query: 393 SNRFQGRYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVHW 214
N + A R L +T + + QF M+ ++AF+HW
Sbjct: 346 PNNVK-----TAVCDIPPRGLKMSATFIGNSTAIQELFKRISE---QFTAMFRRKAFLHW 397
Query: 213 YVGEGMEEGEFSEAREDLAALEKDYEE 133
Y GEGM+E EF+EA ++ L +Y++
Sbjct: 398 YTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 82.6 bits (195), Expect = 2e-16
Identities = 45/147 (30%), Positives = 71/147 (48%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V E+T CF+ N M CDPR Y+ ++RG + K V+ + I+ K + FVD +
Sbjct: 286 VPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWI 345
Query: 393 SNRFQGRYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVHW 214
N + A R L +T + + QF M+ ++AF+HW
Sbjct: 346 PNNVK-----TAVCDIPPRGLKMSATFIGNSTAIQELFKRISE---QFTAMFRRKAFLHW 397
Query: 213 YVGEGMEEGEFSEAREDLAALEKDYEE 133
Y GEGM+E EF+EA ++ L +Y++
Sbjct: 398 YTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 77.0 bits (181), Expect = 1e-14
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAE+T F+ N M CDPR Y+ ++RG + + V+ + +++ K + FV+ +
Sbjct: 286 VAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEWI 345
Query: 393 SNRFQGRY-QLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVH 217
N + +P R L +T + + QF M+ ++AF+H
Sbjct: 346 PNNVKTAVCDIPP------RGLKMAATFVGNSTAIQELFKRISE---QFTAMFRRKAFLH 396
Query: 216 WYVGEGMEEGEFSEAREDLAALEKDYEE 133
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLISEYQQ 424
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 77.0 bits (181), Expect = 1e-14
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Frame = -2
Query: 582 SFPVAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFV 403
S V E+T F+ N M CDPR Y+ ++RG + K V+ + ++ K + FV
Sbjct: 283 SLTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFV 342
Query: 402 DLVSNRFQGRY-QLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRA 226
+ + N + +P RG + +T + + QF M+ ++A
Sbjct: 343 EWIPNNVKTAVCDIPP--RGVK----MAATFVGNSTAIQELFKRISE---QFTAMFRRKA 393
Query: 225 FVHWYVGEGMEEGEFSEAREDLAALEKDYEE 133
F+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 76.6 bits (180), Expect = 1e-14
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAE+T F+ N M CDPR Y+ ++RG + + V+ + ++ K + FV+ +
Sbjct: 286 VAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEWI 345
Query: 393 SNRFQGRY-QLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVH 217
N + +P R L +T + + QF M+ ++AF+H
Sbjct: 346 PNNVKTAVCDIPP------RGLKMSATFIGNSTAIQELFKRISE---QFTAMFRRKAFLH 396
Query: 216 WYVGEGMEEGEFSEAREDLAALEKDYEE 133
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 76.6 bits (180), Expect = 1e-14
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAE+T F+ N M CDPR Y+ ++RG + + V+ + ++ K + FV+ +
Sbjct: 286 VAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWI 345
Query: 393 SNRFQGRY-QLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVH 217
N + +P R L +T + + QF M+ ++AF+H
Sbjct: 346 PNNVKTAVCDIPP------RGLKMAATFVGNSTAIQELFKRISE---QFTAMFRRKAFLH 396
Query: 216 WYVGEGMEEGEFSEAREDLAALEKDYEE 133
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLISEYQQ 424
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 38.7 bits (86), Expect = 0.003
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 4/155 (2%)
Frame = -2
Query: 582 SFPVAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFV 403
+F ++++T + N M C+ Q +++ ++YRG K I +++ + + +
Sbjct: 282 AFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMI 340
Query: 402 D-LVSNRFQGRYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRA 226
+ L + +P+ R L +T + + QF ++ ++A
Sbjct: 341 ESLPKSTNTDVCDIPS------RGLKTSATFIANSTAIQEPLKRISK---QFAGLFRRKA 391
Query: 225 FVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEV 130
F+HWY MEE EF++A DL + + YE+V
Sbjct: 392 FLHWYT---MEESEFTDAENKVNDLISEFQQYEKV 423
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 38.7 bits (86), Expect = 0.003
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 4/155 (2%)
Frame = -2
Query: 582 SFPVAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFV 403
+F ++++T + N M C+ Q +++ ++YRG K I +++ + + +
Sbjct: 282 AFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMI 340
Query: 402 D-LVSNRFQGRYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRA 226
+ L + +P+ R L +T + + QF ++ ++A
Sbjct: 341 ESLPKSTNTDVCDIPS------RGLKTSATFIANSTAIQEPLKRISK---QFAGLFRRKA 391
Query: 225 FVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEV 130
F+HWY MEE EF++A DL + + YE+V
Sbjct: 392 FLHWYT---MEESEFTDAENKVNDLISEFQQYEKV 423
>Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical
protein C10C6.6 protein.
Length = 1178
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1
Query: 493 SHVTCLTGVAFHHLV 537
SH CLTG AFHHLV
Sbjct: 764 SHEFCLTGSAFHHLV 778
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 84 STLRLPHPRLQRSPCRLLRNP--SRGQPGPHGLR-RTLPPPYPHRRTS 218
S R P P+ + P R R+P S+ P P + R+ PP P RR S
Sbjct: 395 SKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRRRS 442
>U21324-10|AAM22045.1| 102|Caenorhabditis elegans Hypothetical
protein C35D10.17 protein.
Length = 102
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -3
Query: 233 SVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVRE 96
+V CT R+WRR+++P R + R + +K WTP +++E
Sbjct: 43 AVWQCTKKE-RIWRRDNNPAYKRRIVELRSLPEK-YWTPALHKLKE 86
>U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein56 protein.
Length = 298
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 70 YFIGLVLFGSLTLAFSGVHADFFVILLEGSQVLTGF 177
YF +VLF T+ H FF++ L +LT F
Sbjct: 60 YFCPMVLFDQSTMKQYSHHCGFFILFLSEFSILTHF 95
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 28.3 bits (60), Expect = 4.5
Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 11/126 (8%)
Frame = -3
Query: 419 VLSNSSTWCPTGFKVGINYQPPTVVPG--------GDLAKVQRAVCMLSNTTAIAEAWAR 264
+L+ S +W + + Y P P +L+ + MLS+TT +
Sbjct: 249 ILTTSDSWNKANALINLLYCTPNACPQQSMLWTNCSNLSTTTSSSTMLSSTTLLTTETET 308
Query: 263 LDHSSTSCTPSVLSCTGTSVRV---WRRESSPKPVRTWLPSRRITKKSAWTPLKARVREP 93
+ SST T + T S + + S+ V+ S S P A E
Sbjct: 309 RESSSTGSTQTTTPSTEPSTTITTPMEQSSTVSSVQKTRTSEDKPSSSTTVPTSASTSES 368
Query: 92 KSTKPM 75
++ PM
Sbjct: 369 STSSPM 374
>AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical
protein Y92H12A.4 protein.
Length = 782
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -3
Query: 347 VPGGDLAKVQRAVCMLSNTTAIAEAWARLDHSSTSCTPSVLSCTGTSVRVWRRESSPKPV 168
+ D A QR L++ EAW + + + ++L+CT TSV + SSP P+
Sbjct: 147 IGSSDFATKQRIFMKLNSMIRENEAWFKSQKACAALVANILTCT-TSVII----SSPAPI 201
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 84 STLRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYP 203
ST+ L P SPC PS P P+G RR+LPP P
Sbjct: 44 STMLLS-PNFSPSPCPRRSLPST--PLPNGHRRSLPPTPP 80
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 11/57 (19%)
Frame = +3
Query: 87 TLRLPHP----RLQRSPCRLLRNPSRGQ------PGPHGLRRTL-PPPYPHRRTSAR 224
T R P P R+ RSP R R+P R Q P P +R+ PPP RR +R
Sbjct: 111 TRRSPSPPRRRRISRSPVRRSRSPPRRQVSRSRSPPPRRQQRSRSPPPAKRRRDQSR 167
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -3
Query: 191 RESSPKPVRTWLPSRR---ITKKSAWTPLKARVREPKSTKP 78
R+ SPK V P ++ + KK P ++ +EP+ +KP
Sbjct: 573 RDPSPKKVAPTAPEKKTPVLAKKEPAGPADSKTKEPEKSKP 613
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 141 NPSRGQPGPHGLRRTLPPPYPHRRTSA 221
N R QP P R PPP PHR+ ++
Sbjct: 14 NRFRKQPPPPPSPRRAPPPPPHRKPAS 40
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,656,219
Number of Sequences: 27780
Number of extensions: 329258
Number of successful extensions: 1316
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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