Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1171
(599 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VAX7 Cluster: CG4869-PA; n=8; Eukaryota|Rep: CG4869-P... 50 6e-05
UniRef50_P52275 Cluster: Tubulin beta-2 chain; n=115; Bilateria|... 48 1e-04
UniRef50_A7TZ32 Cluster: Beta-tubulin; n=1; Lepeophtheirus salmo... 48 2e-04
UniRef50_P04350 Cluster: Tubulin beta-4 chain; n=4602; root|Rep:... 47 4e-04
UniRef50_UPI00003ABCC4 Cluster: UPI00003ABCC4 related cluster; n... 43 0.006
UniRef50_Q3SD83 Cluster: Beta tubulin,putative; n=1; Paramecium ... 42 0.008
UniRef50_UPI00005A581E Cluster: PREDICTED: similar to tubulin, b... 42 0.011
UniRef50_Q4P3J3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.015
UniRef50_Q3SEG3 Cluster: Beta tubulin,putative; n=2; Paramecium ... 40 0.045
UniRef50_Q2U1M2 Cluster: Beta tubulin; n=649; root|Rep: Beta tub... 39 0.10
UniRef50_A4D1N8 Cluster: Similar to beta-tubulin; n=2; Homo/Pan/... 38 0.18
UniRef50_Q24HJ8 Cluster: Tubulin/FtsZ family, GTPase domain cont... 38 0.24
UniRef50_Q227Z6 Cluster: Tubulin/FtsZ family, GTPase domain cont... 36 0.55
UniRef50_UPI0000D9DAEA Cluster: PREDICTED: similar to tubulin, b... 35 1.3
UniRef50_Q26236 Cluster: Beta-tubulin; n=5; Eukaryota|Rep: Beta-... 35 1.3
UniRef50_UPI00005639CD Cluster: UPI00005639CD related cluster; n... 34 2.9
UniRef50_Q5N798 Cluster: Putative uncharacterized protein P0005H... 33 3.9
UniRef50_UPI0000E80C5E Cluster: PREDICTED: hypothetical protein;... 33 5.1
UniRef50_Q3SEG7 Cluster: Theta tubuline, putative; n=1; Parameci... 33 6.8
UniRef50_Q22UN3 Cluster: Tubulin/FtsZ family, GTPase domain cont... 32 9.0
UniRef50_A0DI61 Cluster: Chromosome undetermined scaffold_51, wh... 32 9.0
UniRef50_Q5AB05 Cluster: Putative uncharacterized protein IFH1; ... 32 9.0
>UniRef50_Q9VAX7 Cluster: CG4869-PA; n=8; Eukaryota|Rep: CG4869-PA -
Drosophila melanogaster (Fruit fly)
Length = 522
Score = 49.6 bits (113), Expect = 6e-05
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQQYRRPPRKTDTEF 477
DEMEF EAESN+NDL+SEYQQY+ + EF
Sbjct: 469 DEMEFTEAESNMNDLISEYQQYQEATADDEVEF 501
>UniRef50_P52275 Cluster: Tubulin beta-2 chain; n=115;
Bilateria|Rep: Tubulin beta-2 chain - Caenorhabditis
elegans
Length = 450
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQQYRRPPRKTDTE 480
DEMEF EAESN+NDL+SEYQQY+ + D +
Sbjct: 404 DEMEFTEAESNMNDLISEYQQYQEATAEDDVD 435
>UniRef50_A7TZ32 Cluster: Beta-tubulin; n=1; Lepeophtheirus
salmonis|Rep: Beta-tubulin - Lepeophtheirus salmonis
(salmon louse)
Length = 84
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQQYRRPPRKTDTEF 477
DEMEF EAESN+NDLVSEYQQY+ D F
Sbjct: 43 DEMEFTEAESNMNDLVSEYQQYQEASVDDDEYF 75
>UniRef50_P04350 Cluster: Tubulin beta-4 chain; n=4602; root|Rep:
Tubulin beta-4 chain - Homo sapiens (Human)
Length = 444
Score = 46.8 bits (106), Expect = 4e-04
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQQYR 507
DEMEF EAESN+NDLVSEYQQY+
Sbjct: 404 DEMEFTEAESNMNDLVSEYQQYQ 426
>UniRef50_UPI00003ABCC4 Cluster: UPI00003ABCC4 related cluster; n=1;
Gallus gallus|Rep: UPI00003ABCC4 UniRef100 entry -
Gallus gallus
Length = 177
Score = 42.7 bits (96), Expect = 0.006
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1
Query: 511 YCWYSDTRSLTLLSASLNSISS 576
YCWYS+TRS LLSAS+NSISS
Sbjct: 93 YCWYSETRSFMLLSASVNSISS 114
>UniRef50_Q3SD83 Cluster: Beta tubulin,putative; n=1; Paramecium
tetraurelia|Rep: Beta tubulin,putative - Paramecium
tetraurelia
Length = 430
Score = 42.3 bits (95), Expect = 0.008
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQQY 510
DEMEF EAESN+ND +SEYQ Y
Sbjct: 389 DEMEFTEAESNMNDFISEYQDY 410
>UniRef50_UPI00005A581E Cluster: PREDICTED: similar to tubulin, beta
3; n=2; Canis lupus familiaris|Rep: PREDICTED: similar
to tubulin, beta 3 - Canis familiaris
Length = 363
Score = 41.9 bits (94), Expect = 0.011
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQQYR 507
DE EF EAESN NDLV EYQQY+
Sbjct: 319 DETEFTEAESNTNDLVPEYQQYQ 341
>UniRef50_Q4P3J3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 291
Score = 41.5 bits (93), Expect = 0.015
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQQY 510
DEMEF EAESN+ DL++EYQQY
Sbjct: 220 DEMEFTEAESNLMDLIAEYQQY 241
>UniRef50_Q3SEG3 Cluster: Beta tubulin,putative; n=2; Paramecium
tetraurelia|Rep: Beta tubulin,putative - Paramecium
tetraurelia
Length = 426
Score = 39.9 bits (89), Expect = 0.045
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEY 519
DEMEF EAESN+NDL+SEY
Sbjct: 387 DEMEFTEAESNINDLISEY 405
>UniRef50_Q2U1M2 Cluster: Beta tubulin; n=649; root|Rep: Beta
tubulin - Aspergillus oryzae
Length = 817
Score = 38.7 bits (86), Expect = 0.10
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQQYRRPP 498
DEM+F EAESN+NDL+ EY++++ P
Sbjct: 791 DEMDFVEAESNMNDLIEEYREHQDGP 816
>UniRef50_A4D1N8 Cluster: Similar to beta-tubulin; n=2;
Homo/Pan/Gorilla group|Rep: Similar to beta-tubulin -
Homo sapiens (Human)
Length = 98
Score = 37.9 bits (84), Expect = 0.18
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQQY 510
DEMEF EA+ N+NDLV YQQY
Sbjct: 57 DEMEFTEAKCNMNDLVFAYQQY 78
>UniRef50_Q24HJ8 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=2; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 447
Score = 37.5 bits (83), Expect = 0.24
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQ 516
DEMEF EAESN+ND++ +YQ
Sbjct: 402 DEMEFTEAESNINDVICDYQ 421
>UniRef50_Q227Z6 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 436
Score = 36.3 bits (80), Expect = 0.55
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -1
Query: 584 RAWDEMEFNEAESNVNDLVSEYQQ 513
+ +E+EF EA SNV DL+SEYQQ
Sbjct: 380 KGMEEIEFKEAHSNVMDLISEYQQ 403
>UniRef50_UPI0000D9DAEA Cluster: PREDICTED: similar to tubulin, beta
8; n=1; Macaca mulatta|Rep: PREDICTED: similar to
tubulin, beta 8 - Macaca mulatta
Length = 293
Score = 35.1 bits (77), Expect = 1.3
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQQYRRPPRKTDTEF 477
DEME EA +N+ DL+SE QQY+ K + +F
Sbjct: 77 DEMELTEAVTNMKDLMSESQQYQDAMGKEEGDF 109
>UniRef50_Q26236 Cluster: Beta-tubulin; n=5; Eukaryota|Rep:
Beta-tubulin - Reticulomyxa filosa
Length = 473
Score = 35.1 bits (77), Expect = 1.3
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQ 516
DEMEF E++ NV DLV+EYQ
Sbjct: 411 DEMEFEESDKNVRDLVTEYQ 430
>UniRef50_UPI00005639CD Cluster: UPI00005639CD related cluster; n=1;
Mus musculus|Rep: UPI00005639CD UniRef100 entry - Mus
musculus
Length = 377
Score = 33.9 bits (74), Expect = 2.9
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQQ 513
D+MEF EAESN+N LVSEYQ+
Sbjct: 358 DQMEFMEAESNIN-LVSEYQR 377
>UniRef50_Q5N798 Cluster: Putative uncharacterized protein
P0005H10.5; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0005H10.5 - Oryza sativa subsp. japonica (Rice)
Length = 173
Score = 33.5 bits (73), Expect = 3.9
Identities = 23/47 (48%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 440 ARPAPTPPGLLGRTRCPSSAVASGTVGTQTPDR*RCSLLR*TPS-RP 577
AR AP PP P A AS T T TP R RCS R PS RP
Sbjct: 12 ARQAPHPPLPPSNRHTPPGA-ASATSSTSTPSRERCSSRRPRPSWRP 57
>UniRef50_UPI0000E80C5E Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 231
Score = 33.1 bits (72), Expect = 5.1
Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
Frame = +2
Query: 413 GSEVRSSHGARP-------APTPPGLLGRTRCPSSAVASGTVGTQTPD 535
G+E RS HG RP A PP GR R P SA G GT D
Sbjct: 95 GTEKRSGHGERPGAFAHQSALLPPKRRGRCRFPRSAAGPGRTGTPHRD 142
>UniRef50_Q3SEG7 Cluster: Theta tubuline, putative; n=1; Paramecium
tetraurelia|Rep: Theta tubuline, putative - Paramecium
tetraurelia
Length = 417
Score = 32.7 bits (71), Expect = 6.8
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQQY 510
DE++F EAES+V+DL SEY Y
Sbjct: 385 DELDFVEAESSVSDLFSEYISY 406
>UniRef50_Q22UN3 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 431
Score = 32.3 bits (70), Expect = 9.0
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQ 516
DEMEF EA+ N DL++EYQ
Sbjct: 401 DEMEFQEAKYNTADLITEYQ 420
>UniRef50_A0DI61 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 614
Score = 32.3 bits (70), Expect = 9.0
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = -1
Query: 575 DEMEFNEAESNVNDLVSEYQQYR 507
DE +F+EAESN+N+LV Y+ ++
Sbjct: 29 DETKFSEAESNMNNLVLSYENFK 51
>UniRef50_Q5AB05 Cluster: Putative uncharacterized protein IFH1;
n=2; Candida albicans|Rep: Putative uncharacterized
protein IFH1 - Candida albicans (Yeast)
Length = 773
Score = 32.3 bits (70), Expect = 9.0
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2
Query: 347 DSPYYAASMRFRFESELQRS**GSEVRSSHGARPAPTPPGLLGRTRCPSSAVASGTVGTQ 526
D P Y +SM+ R S + V +H A+ + P +LGR + P S V+ ++G
Sbjct: 470 DLPRYISSMQNRSRSSSNPM---THVHVAHNAKDSYFPSTILGRVKSPESDVSIDSLGEP 526
Query: 527 TPD 535
P+
Sbjct: 527 IPE 529
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,004,814
Number of Sequences: 1657284
Number of extensions: 8408344
Number of successful extensions: 24634
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 23694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24614
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -