Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1171
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   2.5  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   3.3  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   3.3  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   5.7  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.5  
CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    23   10.0 

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 588  GEGMGRDGVQRSREQRQRSGV*VPTVPEATAED 490
            G G G  G    R    R+GV    +PEA +E+
Sbjct: 1501 GGGKGAAGRSNWRYNNMRTGVISTAIPEANSEE 1533


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 566 EFNEAESNVNDLVSEYQQYRRPPRKTDTEF 477
           E  + E+N+N +VSE Q+      K+   F
Sbjct: 703 ELKQTEANINSIVSEMQKTETKQGKSKDAF 732


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 428  SSHGARPAPTPPGLLGRTRCPSSAVASGTVGTQTPDR 538
            SSHG    PTP  ++  T  PS + ASG++G ++ D+
Sbjct: 1347 SSHGG---PTP-SIISHT--PSLSSASGSIGPKSADQ 1377


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 511 YCWYSDTRSLTLLSASLNSISSHALAG 591
           YC YS   + T  +    S SSH+  G
Sbjct: 470 YCTYSSDSTTTTTTTKSASTSSHSTTG 496


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 574  TRWSSTKQRATSTIWCLSTNSTGGH 500
            T W    +  T+  W ++ +S GGH
Sbjct: 1297 TPWDKVCRGETNRRWSMALSSMGGH 1321


>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 335 QHPRDSPYYAASMRFRFESELQR 403
           +H RD+ YY       FE  L+R
Sbjct: 250 RHDRDAAYYGTFSAESFEQALER 272


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,413
Number of Sequences: 2352
Number of extensions: 8869
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)