Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1165
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...   154   7e-40
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...   154   7e-40
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...   101   5e-24
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   2.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   2.2  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   2.2  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score =  154 bits (373), Expect = 7e-40
 Identities = 66/84 (78%), Positives = 77/84 (91%)
 Frame = +3

Query: 3   LLRHNFNRHYTTNRAPLGFHFHASWLKSKKEYRDELIKFIEEMLEKNDVYFTSLIQVIQW 182
           LLRHNFNRH  +NRAPLG HFHASWLKSKKE+++ELIKFIEEML++NDVYF + +QVIQW
Sbjct: 396 LLRHNFNRHLNSNRAPLGLHFHASWLKSKKEFKEELIKFIEEMLQRNDVYFVTNLQVIQW 455

Query: 183 MQNPTELSSLRDFQEWKQDKCDVK 254
           MQNPTEL+ LRDFQEWK +KCD+K
Sbjct: 456 MQNPTELNGLRDFQEWK-EKCDIK 478



 Score =  105 bits (251), Expect = 4e-25
 Identities = 41/51 (80%), Positives = 48/51 (94%)
 Frame = +2

Query: 251 QSQPFCSLPNACPLTTRELPGETLRLFTCMECPNNYPWILDPQGEGYNVKK 403
           + QP+CSLPN+C LTTRELPGETLRLFTCMECPNNYPWILDP G+G++V+K
Sbjct: 478 KGQPYCSLPNSCALTTRELPGETLRLFTCMECPNNYPWILDPTGDGFSVRK 528


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score =  154 bits (373), Expect = 7e-40
 Identities = 66/84 (78%), Positives = 77/84 (91%)
 Frame = +3

Query: 3   LLRHNFNRHYTTNRAPLGFHFHASWLKSKKEYRDELIKFIEEMLEKNDVYFTSLIQVIQW 182
           LLRHNFNRH  +NRAPLG HFHASWLKSKKE+++ELIKFIEEML++NDVYF + +QVIQW
Sbjct: 403 LLRHNFNRHLNSNRAPLGLHFHASWLKSKKEFKEELIKFIEEMLQRNDVYFVTNLQVIQW 462

Query: 183 MQNPTELSSLRDFQEWKQDKCDVK 254
           MQNPTEL+ LRDFQEWK +KCD+K
Sbjct: 463 MQNPTELNGLRDFQEWK-EKCDIK 485



 Score =  103 bits (247), Expect = 1e-24
 Identities = 40/51 (78%), Positives = 48/51 (94%)
 Frame = +2

Query: 251 QSQPFCSLPNACPLTTRELPGETLRLFTCMECPNNYPWILDPQGEGYNVKK 403
           + QP+CSLPN+C LTTRELPGETLRLFTCMECPNNYPWIL+P G+G++V+K
Sbjct: 485 KGQPYCSLPNSCALTTRELPGETLRLFTCMECPNNYPWILEPTGDGFSVRK 535


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score =  101 bits (242), Expect = 5e-24
 Identities = 42/86 (48%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
 Frame = +3

Query: 6   LRHNFNRHYTTNRAPLGFHFHASWLKSKKEYRDELIKFIEEML-EKNDVYFTSLIQVIQW 182
           L HNF+RHY  NRAPLG +FHA+WLK+  E+ D  + +++E+L   NDVYF ++ QVIQW
Sbjct: 405 LNHNFDRHYEENRAPLGLYFHAAWLKNNPEFLDAFLYWVDEILANHNDVYFVTMTQVIQW 464

Query: 183 MQNPTELSSLRDFQEWKQDKCDVKVN 260
           +QNP  ++  ++F+ W+ +KC V+ N
Sbjct: 465 IQNPRTITESKNFEPWR-EKCVVEGN 489



 Score = 73.7 bits (173), Expect = 1e-15
 Identities = 25/47 (53%), Positives = 37/47 (78%)
 Frame = +2

Query: 251 QSQPFCSLPNACPLTTRELPGETLRLFTCMECPNNYPWILDPQGEGY 391
           +  P C +P++C LT++E+PGET+ L TC+ CPNNYPW+ DP G+G+
Sbjct: 487 EGNPHCWVPHSCKLTSKEVPGETINLQTCVRCPNNYPWVNDPTGDGF 533


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 274 QRTERLTLTSHLSCFHSWKSRSDDNSVGFC 185
           Q  +RL   + +   + W S++ DNS  FC
Sbjct: 180 QIVDRLLSHAPIDSANQWYSQTIDNSYQFC 209


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 433 YTCK*ILNNFINNYIATCNIILS 501
           +T K  +NN  NN + TC I L+
Sbjct: 482 FTYKITVNNSGNNRMGTCRIFLA 504


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 274 QRTERLTLTSHLSCFHSWKSRSDDNSVGFC 185
           Q  +RL   + +   + W S++ DNS  FC
Sbjct: 171 QIVDRLLSHAPIDSANQWYSQTIDNSYQFC 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,105
Number of Sequences: 336
Number of extensions: 3360
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)