Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1164
         (601 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O15943 Cluster: Neural-cadherin precursor; n=42; Arthro...    37   0.42 
UniRef50_Q9VJB6 Cluster: Putative neural-cadherin 2 precursor; n...    36   0.55 
UniRef50_Q7Q1N1 Cluster: ENSANGP00000013153; n=1; Anopheles gamb...    34   2.2  
UniRef50_Q17LY6 Cluster: Cadherin; n=6; Culicidae|Rep: Cadherin ...    33   3.9  

>UniRef50_O15943 Cluster: Neural-cadherin precursor; n=42;
            Arthropoda|Rep: Neural-cadherin precursor - Drosophila
            melanogaster (Fruit fly)
          Length = 3097

 Score = 36.7 bits (81), Expect = 0.42
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -1

Query: 601  TQITEEDDRNLPKRVL 554
            TQITEEDDRNLPKRVL
Sbjct: 1521 TQITEEDDRNLPKRVL 1536


>UniRef50_Q9VJB6 Cluster: Putative neural-cadherin 2 precursor; n=5;
           Diptera|Rep: Putative neural-cadherin 2 precursor -
           Drosophila melanogaster (Fruit fly)
          Length = 2215

 Score = 36.3 bits (80), Expect = 0.55
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = -1

Query: 601 TQITEEDDRNLPKRVL 554
           TQITEEDDRNLPKR+L
Sbjct: 256 TQITEEDDRNLPKRIL 271


>UniRef50_Q7Q1N1 Cluster: ENSANGP00000013153; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000013153 - Anopheles gambiae
           str. PEST
          Length = 208

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -1

Query: 601 TQITEEDDRNLPKRVL 554
           TQITEEDDR LPKRVL
Sbjct: 85  TQITEEDDRGLPKRVL 100



 Score = 34.3 bits (75), Expect = 2.2
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -1

Query: 601 TQITEEDDRNLPKRVL 554
           TQITEEDDR LPKRVL
Sbjct: 188 TQITEEDDRGLPKRVL 203


>UniRef50_Q17LY6 Cluster: Cadherin; n=6; Culicidae|Rep: Cadherin -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1653

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -1

Query: 601 TQITEEDDRNLPKRVL 554
           TQITEEDDR LPKRV+
Sbjct: 82  TQITEEDDRGLPKRVM 97


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,966,040
Number of Sequences: 1657284
Number of extensions: 7417564
Number of successful extensions: 15227
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15227
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)