Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1162
         (652 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1CHZ7 Cluster: Transcription regulator BDF1, putative;...    36   1.1  
UniRef50_P90895 Cluster: Soluble guanylate cyclase gcy-33; n=2; ...    35   1.9  
UniRef50_A5IZ18 Cluster: Putative uncharacterized protein; n=2; ...    33   5.9  

>UniRef50_A1CHZ7 Cluster: Transcription regulator BDF1, putative;
           n=9; Eurotiomycetidae|Rep: Transcription regulator BDF1,
           putative - Aspergillus clavatus
          Length = 840

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -3

Query: 641 RDQRPPLVIPRDHP-VPTAKTGPEDHPTLPRGQLRFVFASKEREADWNSNLGRNRVELE 468
           +D  P  V PRD P VP  K   +D P  P   L     S+ER+AD        R +LE
Sbjct: 193 QDMAPRNVAPRDAPSVPPLKAVDQDMPDAPDVPLSPTKVSRERDADTGDEPSAKRTKLE 251


>UniRef50_P90895 Cluster: Soluble guanylate cyclase gcy-33; n=2;
            Caenorhabditis|Rep: Soluble guanylate cyclase gcy-33 -
            Caenorhabditis elegans
          Length = 945

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 25/101 (24%), Positives = 40/101 (39%)
 Frame = -2

Query: 651  SYHEGSASSVGDTTGSPSTDSQDGTRGSPNLTQRTAQICLCKQGTRGRLELQFRKEPG*A 472
            S    + S +GD       + +D      +L +RT      K  T  RL  Q   E    
Sbjct: 838  SLPSATPSEIGDAISKKKLEKEDSNSSMSSLDERTT--VSAKPTTTRRLLNQKDLEKEKK 895

Query: 471  RAELQQECFRKSPFHKNQ*KSKRFDGESADFKCQKIRRENK 349
            R+ +       S  H +  +SK+   + +  KC+ IR +NK
Sbjct: 896  RSSMAGSSVTSSSAHSHSIRSKKDTRDKSRCKCEDIRADNK 936


>UniRef50_A5IZ18 Cluster: Putative uncharacterized protein; n=2;
           Mycoplasma|Rep: Putative uncharacterized protein -
           Mycoplasma agalactiae
          Length = 686

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = -3

Query: 566 PTLPRGQLRFVFASKEREADWNSNLGRNRVELERNFSKNASESPPFIRINKNLSGSTENL 387
           P  P G+L F   S  +  ++  NL + ++ +    +KN     PF+ +N+ + G +EN 
Sbjct: 276 PYEPEGKLEFYEDSSNKFTEFKINLQKYKISM---LNKNGKLYLPFVMLNQLILGESENQ 332

Query: 386 LISN 375
           L  N
Sbjct: 333 LYFN 336


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,848,963
Number of Sequences: 1657284
Number of extensions: 12382405
Number of successful extensions: 35763
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35728
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)