Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1162
         (652 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064981-1|AAH64981.1|  951|Homo sapiens coiled-coil and C2 doma...    31   2.7  
AK023399-1|BAB14561.1|  387|Homo sapiens protein ( Homo sapiens ...    31   2.7  
AK000248-1|BAA91029.1|  467|Homo sapiens protein ( Homo sapiens ...    31   2.7  
AF536205-1|AAN04488.1|  950|Homo sapiens hypothetical protein pr...    31   2.7  
AB097002-1|BAC77355.1|  951|Homo sapiens putative NFkB activatin...    31   2.7  
BC064632-1|AAH64632.1|  711|Homo sapiens MCF2L2 protein protein.       30   6.2  

>BC064981-1|AAH64981.1|  951|Homo sapiens coiled-coil and C2 domain
           containing 1A protein.
          Length = 951

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = -3

Query: 650 PTTRDQRPPLVIPRDHPVPTAKTGPEDHPTLPRGQLRFVFASKER--EADWNSNLGRNRV 477
           PT + + PP   P+    PTAK  P+   T  + QL F+   K++  +A   +   +N V
Sbjct: 459 PTAQPKAPPSRTPQSGSAPTAKAPPKATSTRAQQQLAFLEGRKKQLLQAALRAK-QKNDV 517

Query: 476 ELERNFSKNASESPPFIRINKN 411
           E  +   + A    P +  ++N
Sbjct: 518 EGAKMHLRQAKGLEPMLEASRN 539


>AK023399-1|BAB14561.1|  387|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13337 fis, clone OVARC1001880. ).
          Length = 387

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = -3

Query: 650 PTTRDQRPPLVIPRDHPVPTAKTGPEDHPTLPRGQLRFVFASKER--EADWNSNLGRNRV 477
           PT + + PP   P+    PTAK  P+   T  + QL F+   K++  +A   +   +N V
Sbjct: 104 PTAQPKAPPSRTPQSGSAPTAKAPPKATSTRAQQQLAFLEGRKKQLLQAALRAK-QKNDV 162

Query: 476 ELERNFSKNASESPPFIRINKN 411
           E  +   + A    P +  ++N
Sbjct: 163 EGAKMHLRQAKGLEPMLEASRN 184


>AK000248-1|BAA91029.1|  467|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20241 fis, clone COLF6335. ).
          Length = 467

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = -3

Query: 650 PTTRDQRPPLVIPRDHPVPTAKTGPEDHPTLPRGQLRFVFASKER--EADWNSNLGRNRV 477
           PT + + PP   P+    PTAK  P+   T  + QL F+   K++  +A   +   +N V
Sbjct: 309 PTAQPKAPPSRTPQSGSAPTAKAPPKATSTRAQQQLAFLEGRKKQLLQAALRAK-QKNDV 367

Query: 476 ELERNFSKNASESPPFIRINKN 411
           E  +   + A    P +  ++N
Sbjct: 368 EGAKMHLRQAKGLEPMLEASRN 389


>AF536205-1|AAN04488.1|  950|Homo sapiens hypothetical protein
           protein.
          Length = 950

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = -3

Query: 650 PTTRDQRPPLVIPRDHPVPTAKTGPEDHPTLPRGQLRFVFASKER--EADWNSNLGRNRV 477
           PT + + PP   P+    PTAK  P+   T  + QL F+   K++  +A   +   +N V
Sbjct: 459 PTAQPKAPPSRTPQSGSAPTAKAPPKATSTRAQQQLAFLEGRKKQLLQAALRAK-QKNDV 517

Query: 476 ELERNFSKNASESPPFIRINKN 411
           E  +   + A    P +  ++N
Sbjct: 518 EGAKMHLRQAKGLEPMLEASRN 539


>AB097002-1|BAC77355.1|  951|Homo sapiens putative NFkB activating
           protein protein.
          Length = 951

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = -3

Query: 650 PTTRDQRPPLVIPRDHPVPTAKTGPEDHPTLPRGQLRFVFASKER--EADWNSNLGRNRV 477
           PT + + PP   P+    PTAK  P+   T  + QL F+   K++  +A   +   +N V
Sbjct: 459 PTAQPKAPPSRTPQSGSAPTAKAPPKATSTRAQQQLAFLEGRKKQLLQAALRAK-QKNDV 517

Query: 476 ELERNFSKNASESPPFIRINKN 411
           E  +   + A    P +  ++N
Sbjct: 518 EGAKMHLRQAKGLEPMLEASRN 539


>BC064632-1|AAH64632.1|  711|Homo sapiens MCF2L2 protein protein.
          Length = 711

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 254 IFG*IIKIYTFHR*PFLKILRSIVK**EFITHLFSRRI 367
           +FG I ++Y FH   FLK L    +  E + H F +R+
Sbjct: 669 LFGNIRELYEFHNRTFLKELEKCAENPELLAHCFLKRV 706


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,182,895
Number of Sequences: 237096
Number of extensions: 1949705
Number of successful extensions: 4748
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4738
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)