Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1162
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE...    30   3.1  
BT029132-1|ABJ17065.1| 1335|Drosophila melanogaster IP16240p pro...    28   9.6  
AE014297-3565|AAF56311.1| 1729|Drosophila melanogaster CG6631-PA...    28   9.6  

>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
            isoform E protein.
          Length = 9606

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 9/32 (28%), Positives = 23/32 (71%)
 Frame = -1

Query: 589  PRRDQRITQPYPEDSSDLSLQARNERQTGTPI 494
            PR++++I++P P+  S+ + +  N+++T  P+
Sbjct: 4001 PRKERKISKPQPKPQSENTTKRNNKKETREPV 4032


>BT029132-1|ABJ17065.1| 1335|Drosophila melanogaster IP16240p
           protein.
          Length = 1335

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 641 RDQRPPLVIPRDHPVPTAKTGPEDHPTLPRGQ 546
           R++  P   PR  P  TAK  P+   T PR Q
Sbjct: 333 REEPVPAPAPRKSPTKTAKGSPKKTVTAPRNQ 364


>AE014297-3565|AAF56311.1| 1729|Drosophila melanogaster CG6631-PA,
           isoform A protein.
          Length = 1729

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 641 RDQRPPLVIPRDHPVPTAKTGPEDHPTLPRGQ 546
           R++  P   PR  P  TAK  P+   T PR Q
Sbjct: 333 REEPVPAPAPRKSPTKTAKGSPKKTVTAPRNQ 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,944,282
Number of Sequences: 53049
Number of extensions: 569446
Number of successful extensions: 1759
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)