Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1161
         (538 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7AL26 Cluster: Putative uncharacterized protein; n=1; ...    33   3.1  
UniRef50_Q74FW3 Cluster: Mg chelatase-related protein; n=11; Bac...    32   7.3  
UniRef50_Q10V53 Cluster: Putative uncharacterized protein; n=3; ...    32   7.3  
UniRef50_A7TG56 Cluster: Putative uncharacterized protein; n=1; ...    32   7.3  

>UniRef50_A7AL26 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides merdae ATCC 43184|Rep: Putative
           uncharacterized protein - Parabacteroides merdae ATCC
           43184
          Length = 286

 Score = 33.5 bits (73), Expect = 3.1
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -1

Query: 229 SKRVSKFIILLKLFHPYVSGCNTSRSQTADSSY-FDVI 119
           S ++SK +I L     +V+GCNT+  QTAD+   FD I
Sbjct: 5   STQISKSLIALFFLGMFVTGCNTNTKQTADNDIKFDSI 42


>UniRef50_Q74FW3 Cluster: Mg chelatase-related protein; n=11;
           Bacteria|Rep: Mg chelatase-related protein - Geobacter
           sulfurreducens
          Length = 509

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -3

Query: 527 GTRGRTELPI*EGTRVELERELQQECFRKSPFHKNQYRSKRFGRRIC 387
           G  G   L I    RVE  RE+Q++ FR S  H N   + RF ++ C
Sbjct: 403 GREGEGSLDI--SRRVESAREVQRDRFRGSKVHSNAQMTPRFIKKYC 447


>UniRef50_Q10V53 Cluster: Putative uncharacterized protein; n=3;
           Bacteria|Rep: Putative uncharacterized protein -
           Trichodesmium erythraeum (strain IMS101)
          Length = 452

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -1

Query: 481 LSSSGNFSKNASESPPFIRINIDLSG 404
           L++  N  KNASES P I + +DLSG
Sbjct: 92  LNTENNVIKNASESTPAINLEVDLSG 117


>UniRef50_A7TG56 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 877

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 19/77 (24%), Positives = 34/77 (44%)
 Frame = -1

Query: 526 EREAELNSQFRKEPGLSSSGNFSKNASESPPFIRINIDLSGSDGESADFQCQKIRRENKW 347
           +RE  L+    +  G+SS   +     E PP   +++D S S   S+D     ++  N  
Sbjct: 687 DRELNLSDNINELKGISSKNGYPNIDEEFPPIRELDVDESDS---SSDEDNNNVQTSNMG 743

Query: 346 VINSYYLPIDLKILRKG 296
            +N  +  ++L  L  G
Sbjct: 744 ELNDEFADLELAPLEDG 760


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,863,432
Number of Sequences: 1657284
Number of extensions: 8915886
Number of successful extensions: 18683
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18680
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34156095254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)