Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1161
         (538 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064632-1|AAH64632.1|  711|Homo sapiens MCF2L2 protein protein.       30   4.5  
AJ225742-1|CAA12607.1|   75|Homo sapiens Ig heavy chain variable...    30   4.5  

>BC064632-1|AAH64632.1|  711|Homo sapiens MCF2L2 protein protein.
          Length = 711

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 255 IFG*IIKIYTFHR*PFLKILRSIGK**EFITHLFSRRI 368
           +FG I ++Y FH   FLK L    +  E + H F +R+
Sbjct: 669 LFGNIRELYEFHNRTFLKELEKCAENPELLAHCFLKRV 706


>AJ225742-1|CAA12607.1|   75|Homo sapiens Ig heavy chain variable
           region protein.
          Length = 75

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = -1

Query: 487 PGLSSSGNFSKNASESPPFIRINIDLSGSDGESADFQCQKIRRENKWVINSYYLPIDL 314
           P L S    S + S++   +R+N   S +  ++A + C    R+  W+++SYY  +D+
Sbjct: 20  PSLKSRVTISXDTSKNHFSLRLN---SVTAADTAVYYCATSSRDFXWLLSSYYYNLDV 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,841,053
Number of Sequences: 237096
Number of extensions: 1332674
Number of successful extensions: 2332
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2332
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)