Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1150
         (611 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB196633-1|BAE53435.1| 1857|Homo sapiens C8orfK23 protein protein.     30   5.6  
AM081630-1|CAL05776.1|  101|Homo sapiens immunoglobulin heavy ch...    30   7.4  

>AB196633-1|BAE53435.1| 1857|Homo sapiens C8orfK23 protein protein.
          Length = 1857

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 269  WP-SFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPN 397
            WP S    +TGK  A  +L+  +    +P G   K P P+A PN
Sbjct: 1754 WPFSKSKELTGKVEAEFHLVTAEEAEKNPVGKARKEPEPLAKPN 1797


>AM081630-1|CAL05776.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = -1

Query: 314 VTPGFSQSRRCKTTASEL*YTHYRANWVPGPPSSIFSRIINTLDGGWC 171
           V PG S    C  TASEL +++Y  +WV   P      +    D G C
Sbjct: 15  VQPGGSLRLSC--TASELTFSNYAMSWVRQAPEKGLQWVSTICDSGGC 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,158,587
Number of Sequences: 237096
Number of extensions: 2138924
Number of successful extensions: 7742
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7742
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)