Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1150
         (611 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical pr...    31   0.86 
Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical pr...    31   0.86 
AL021481-7|CAA16331.3|  629|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z92833-2|CAB07379.1|  891|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z83129-7|CAB05644.1|  256|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AL021508-1|CAA16431.1|  170|Caenorhabditis elegans Hypothetical ...    27   8.0  

>Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical
           protein F32H2.1b protein.
          Length = 928

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 223 GPGTQFAL**VYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 357
           G  T++A+   +YN L     +  W N  V +L  L   P F SW
Sbjct: 229 GSRTEWAVKSKWYNELNPKWNKEHWSNEEVEKLKYLRESPKFVSW 273


>Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical
           protein F32H2.1a protein.
          Length = 944

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 223 GPGTQFAL**VYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 357
           G  T++A+   +YN L     +  W N  V +L  L   P F SW
Sbjct: 229 GSRTEWAVKSKWYNELNPKWNKEHWSNEEVEKLKYLRESPKFVSW 273


>AL021481-7|CAA16331.3|  629|Caenorhabditis elegans Hypothetical
           protein Y43F4B.2 protein.
          Length = 629

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +2

Query: 239 SPYSECITIHWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNS 400
           SP+ +  T + P ++ +   K+  L +L+  + I  SP G+  KR AP+ + N+
Sbjct: 145 SPFEDEETPYHPDWF-LTNSKSHVLRSLMHYRPIANSPRGISTKRGAPLVIFNN 197


>Z92833-2|CAB07379.1|  891|Caenorhabditis elegans Hypothetical
           protein F38A6.2 protein.
          Length = 891

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = -3

Query: 426 LPFAIQAAQLLGRAIGAGLFAITPAGE--RGMCCKAIKLGNARV 301
           L F+  +  L G++IGA L   T AGE   G   K +K G++RV
Sbjct: 761 LDFSSDSQYLRGQSIGAHLLFWTKAGEICDGTSVKDVKWGSSRV 804


>Z83129-7|CAB05644.1|  256|Caenorhabditis elegans Hypothetical
           protein W06G6.12 protein.
          Length = 256

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -3

Query: 99  C*FWVPKRMRKQ--HTVPSCLVLLNNTVFISL 10
           C +WV KRM  Q  HT P+C   +   V  SL
Sbjct: 123 CAYWVSKRMSSQEHHTCPNCNCRVKAHVAFSL 154


>AL021508-1|CAA16431.1|  170|Caenorhabditis elegans Hypothetical
           protein Y70C5B.1 protein.
          Length = 170

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -3

Query: 99  C*FWVPKRMRKQ--HTVPSCLVLLNNTVFISL 10
           C +WV KRM  Q  HT P+C   +   V  SL
Sbjct: 37  CAYWVSKRMSSQEHHTCPNCNCRVKAHVAFSL 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,960,020
Number of Sequences: 27780
Number of extensions: 319377
Number of successful extensions: 740
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)