Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1148
         (672 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RGH3 Cluster: Expressed protein; n=2; Plasmodium (Vin...    34   3.6  
UniRef50_Q7RPB6 Cluster: Putative uncharacterized protein PY0154...    33   4.8  

>UniRef50_Q7RGH3 Cluster: Expressed protein; n=2; Plasmodium
           (Vinckeia)|Rep: Expressed protein - Plasmodium yoelii
           yoelii
          Length = 1097

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 28/65 (43%), Positives = 35/65 (53%)
 Frame = +1

Query: 235 QLHSMSILKYNLSYLKHILKNNNTNITYLSCIN*FFGTSNYYFTLTILLYISK*RNKKNY 414
           Q  + SIL YN+  L   +KNN+ NITYLS I       NY      LLY+S   NK + 
Sbjct: 800 QKENNSILTYNIDKL---IKNNDKNITYLSVI--LLSIYNYN---KGLLYVSNKMNKYD- 850

Query: 415 IHFLY 429
           I FL+
Sbjct: 851 ISFLF 855


>UniRef50_Q7RPB6 Cluster: Putative uncharacterized protein PY01543;
           n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01543 - Plasmodium yoelii yoelii
          Length = 1776

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 469 NLILIIIERLLFKHIKNVC--NFFYFFT*KCIIKSSK*NNNCWSQKI 335
           N I  I+ + + KHIKN+   N FY+F   C+ K    N  C S KI
Sbjct: 688 NNIKKIVLKYIEKHIKNIIHNNVFYYFPCVCVTKERDHNKFCSSGKI 734


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,872,382
Number of Sequences: 1657284
Number of extensions: 6849098
Number of successful extensions: 13212
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13205
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)