SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1147
         (584 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical pr...   157   5e-39
Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical pr...   157   5e-39
Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical pr...   157   5e-39
X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.       157   5e-39
X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.       157   5e-39
X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.       157   5e-39
U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4...   157   5e-39
U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4...   157   5e-39
U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4...   157   5e-39
X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.       151   4e-37
Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical pr...   149   1e-36
AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical ...    88   5e-18
AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical...    80   1e-15
Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical pr...    61   7e-10
AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 comple...    51   5e-07
U40799-8|AAA81487.1|  552|Caenorhabditis elegans Hypothetical pr...    48   6e-06
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical...    33   0.15 
Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical pr...    32   0.26 
U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related p...    32   0.26 
U40426-4|AAP40527.1|  144|Caenorhabditis elegans Diacylglycerol ...    31   0.46 
U40426-3|AAP40528.1|  351|Caenorhabditis elegans Diacylglycerol ...    31   0.46 
U40426-2|AAP40526.1|  536|Caenorhabditis elegans Diacylglycerol ...    31   0.46 
U42436-1|AAF99891.1|  305|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U41017-5|AAC48216.2|  495|Caenorhabditis elegans C.elegans homeo...    29   3.2  
AJ427855-1|CAD20808.1|  495|Caenorhabditis elegans CEH-21 protei...    29   3.2  
AL032654-9|CAA21720.1|  404|Caenorhabditis elegans Hypothetical ...    28   5.6  
U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resis...    27   9.8  
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis...    27   9.8  
U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resis...    27   9.8  
U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resis...    27   9.8  
U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resis...    27   9.8  
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res...    27   9.8  

>Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.6 protein.
          Length = 376

 Score =  157 bits (381), Expect = 5e-39
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = -2

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363

Query: 328 DESGPSIVHRKCF 290
           DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = -3

Query: 582 TYNSIMKCDVDIRKDLYANTVLSGG 508
           +YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGG 303


>Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.5 protein.
          Length = 376

 Score =  157 bits (381), Expect = 5e-39
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = -2

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363

Query: 328 DESGPSIVHRKCF 290
           DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = -3

Query: 582 TYNSIMKCDVDIRKDLYANTVLSGG 508
           +YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGG 303


>Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.4 protein.
          Length = 376

 Score =  157 bits (381), Expect = 5e-39
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = -2

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363

Query: 328 DESGPSIVHRKCF 290
           DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = -3

Query: 582 TYNSIMKCDVDIRKDLYANTVLSGG 508
           +YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGG 303


>X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  157 bits (381), Expect = 5e-39
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = -2

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363

Query: 328 DESGPSIVHRKCF 290
           DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = -3

Query: 582 TYNSIMKCDVDIRKDLYANTVLSGG 508
           +YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGG 303


>X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  157 bits (381), Expect = 5e-39
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = -2

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363

Query: 328 DESGPSIVHRKCF 290
           DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = -3

Query: 582 TYNSIMKCDVDIRKDLYANTVLSGG 508
           +YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGG 303


>X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  157 bits (381), Expect = 5e-39
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = -2

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363

Query: 328 DESGPSIVHRKCF 290
           DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = -3

Query: 582 TYNSIMKCDVDIRKDLYANTVLSGG 508
           +YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGG 303


>U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4,
           isoform b protein.
          Length = 332

 Score =  157 bits (381), Expect = 5e-39
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = -2

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 260 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 319

Query: 328 DESGPSIVHRKCF 290
           DESGPSIVHRKCF
Sbjct: 320 DESGPSIVHRKCF 332



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = -3

Query: 582 TYNSIMKCDVDIRKDLYANTVLSGG 508
           +YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 235 SYNSIMKCDIDIRKDLYANTVLSGG 259


>U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4,
           isoform c protein.
          Length = 362

 Score =  157 bits (381), Expect = 5e-39
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = -2

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 290 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 349

Query: 328 DESGPSIVHRKCF 290
           DESGPSIVHRKCF
Sbjct: 350 DESGPSIVHRKCF 362



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = -3

Query: 582 TYNSIMKCDVDIRKDLYANTVLSGG 508
           +YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 265 SYNSIMKCDIDIRKDLYANTVLSGG 289


>U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4,
           isoform a protein.
          Length = 376

 Score =  157 bits (381), Expect = 5e-39
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = -2

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363

Query: 328 DESGPSIVHRKCF 290
           DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = -3

Query: 582 TYNSIMKCDVDIRKDLYANTVLSGG 508
           +YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGG 303


>X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.
          Length = 375

 Score =  151 bits (366), Expect = 4e-37
 Identities = 72/73 (98%), Positives = 72/73 (98%)
 Frame = -2

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           TTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362

Query: 328 DESGPSIVHRKCF 290
           DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = -3

Query: 582 TYNSIMKCDVDIRKDLYANTVLSGG 508
           +YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGG 303


>Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical
           protein T25C8.2 protein.
          Length = 375

 Score =  149 bits (361), Expect = 1e-36
 Identities = 69/73 (94%), Positives = 71/73 (97%)
 Frame = -2

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           T+M+PGIADRMQKEI  LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 303 TSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362

Query: 328 DESGPSIVHRKCF 290
           DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375



 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = -3

Query: 582 TYNSIMKCDVDIRKDLYANTVLSGG 508
           TY SIMKCDVDIRKDLYANTVLSGG
Sbjct: 278 TYQSIMKCDVDIRKDLYANTVLSGG 302


>AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical
           protein ZK616.4 protein.
          Length = 436

 Score = 87.8 bits (208), Expect = 5e-18
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
 Frame = -2

Query: 493 GIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDE 323
           G  +R+   +    P T+K+++ A P   ERKY  WIGGSIL SL TFQQMW+SK EYDE
Sbjct: 366 GFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDE 425

Query: 322 SGPSIVHRKC 293
           SG SIV +KC
Sbjct: 426 SGKSIVEKKC 435


>AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical
           protein Y53F4B.22 protein.
          Length = 374

 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 34/73 (46%), Positives = 51/73 (69%)
 Frame = -2

Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
           TT++ G  DR+  E+  +AP+  KI+I A  ER    WIGGSI+ASL TF++MW+ K+EY
Sbjct: 302 TTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEY 361

Query: 328 DESGPSIVHRKCF 290
           ++ G S +H++ F
Sbjct: 362 EDMGASAMHKRFF 374



 Score = 40.7 bits (91), Expect = 7e-04
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = -3

Query: 573 SIMKCDVDIRKDLYANTVLSGG 508
           SIMKCDVD+R+ LY+N VLSGG
Sbjct: 280 SIMKCDVDLRQTLYSNIVLSGG 301


>Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical
           protein K07C5.1 protein.
          Length = 395

 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 13/77 (16%)
 Frame = -2

Query: 508 TTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL-- 368
           TTMYPG+  R++KE+  L           A    KI+I APP RK+ V++GG++LA+L  
Sbjct: 307 TTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMK 366

Query: 367 STFQQMWISKQEYDESG 317
              Q  W+SK+EY+E G
Sbjct: 367 DRDQDFWVSKKEYEEGG 383



 Score = 27.1 bits (57), Expect = 9.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 579 YNSIMKCDVDIRKDLYANTVLSGG 508
           +  I   D+D R D Y + VLSGG
Sbjct: 283 FGCIQASDIDTRLDFYKHIVLSGG 306


>AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 complex
           component protein 1 protein.
          Length = 425

 Score = 51.2 bits (117), Expect = 5e-07
 Identities = 23/50 (46%), Positives = 34/50 (68%)
 Frame = -2

Query: 457 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 308
           L P  + +++I+   ++Y+VW GGS+LAS S F Q+  +K EY E GPSI
Sbjct: 365 LKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414



 Score = 32.3 bits (70), Expect = 0.26
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 570 IMKCDVDIRKDLYANTVLSGG 508
           I +C +D+R+ LY N VLSGG
Sbjct: 311 IQQCPIDVRRGLYENIVLSGG 331


>U40799-8|AAA81487.1|  552|Caenorhabditis elegans Hypothetical
           protein F42C5.9 protein.
          Length = 552

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 21/69 (30%), Positives = 42/69 (60%)
 Frame = -2

Query: 538 LVRQHRIVRWTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 359
           L R   +    ++ PGIA+++++E++ + P+T+  ++   P R  + ++G  I+AS STF
Sbjct: 471 LYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTF 530

Query: 358 QQMWISKQE 332
           +   IS Q+
Sbjct: 531 EDSCISLQQ 539



 Score = 29.1 bits (62), Expect = 2.4
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 579 YNSIMKCDVDIRKDLYANTVLSGG 508
           + +I++C +D R+ LY N  L+GG
Sbjct: 457 HEAILQCPIDSRRTLYRNIYLAGG 480


>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
            protein Y51A2D.15 protein.
          Length = 1222

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = -3

Query: 408  STPYGSVDRSSPPSLPSNKCG-SRNKSTTSLAPPLY-TGSASKRTARRCLQQPGPAAQFR 235
            S+ Y + +RSSPP   ++ C  S +  +T    PL+ + S SK +A +    P P++ F 
Sbjct: 1128 SSVYSADERSSPPLAGNSTCSVSTSSDSTPDECPLHGSRSFSKISALKIQSSPSPSSSFS 1187

Query: 234  LVISVNLIVRKILL 193
              +S+    +  LL
Sbjct: 1188 RFLSLRRTAKPSLL 1201


>Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical
           protein C08B11.6 protein.
          Length = 418

 Score = 32.3 bits (70), Expect = 0.26
 Identities = 18/82 (21%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
 Frame = -2

Query: 520 IVRWTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQM 350
           ++  ++ +PG  +R+++E+ ++ P+   + +   +  P+     W  G  L + S     
Sbjct: 314 VIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQTHS--WHCGQELLTASKVP-- 369

Query: 349 WISKQEYDESGPSIVHRKCF*T 284
           WI+++++DE G S+     F T
Sbjct: 370 WINRKDWDERGDSLEFSNFFQT 391


>U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related
           protein-like protein.
          Length = 418

 Score = 32.3 bits (70), Expect = 0.26
 Identities = 18/82 (21%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
 Frame = -2

Query: 520 IVRWTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQM 350
           ++  ++ +PG  +R+++E+ ++ P+   + +   +  P+     W  G  L + S     
Sbjct: 314 VIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQTHS--WHCGQELLTASKVP-- 369

Query: 349 WISKQEYDESGPSIVHRKCF*T 284
           WI+++++DE G S+     F T
Sbjct: 370 WINRKDWDERGDSLEFSNFFQT 391


>U40426-4|AAP40527.1|  144|Caenorhabditis elegans Diacylglycerol
           kinase protein 2,isoform b protein.
          Length = 144

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 395 PYGVLPLWRSNDLNLHCRWGESCD 466
           P  VLPL   NDL+   +WG+ CD
Sbjct: 97  PVAVLPLGTGNDLSRLLKWGKKCD 120


>U40426-3|AAP40528.1|  351|Caenorhabditis elegans Diacylglycerol
           kinase protein 2,isoform c protein.
          Length = 351

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 395 PYGVLPLWRSNDLNLHCRWGESCD 466
           P  VLPL   NDL+   +WG+ CD
Sbjct: 97  PVAVLPLGTGNDLSRLLKWGKKCD 120


>U40426-2|AAP40526.1|  536|Caenorhabditis elegans Diacylglycerol
           kinase protein 2,isoform a protein.
          Length = 536

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 395 PYGVLPLWRSNDLNLHCRWGESCD 466
           P  VLPL   NDL+   +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305


>U42436-1|AAF99891.1|  305|Caenorhabditis elegans Hypothetical
           protein C49H3.8 protein.
          Length = 305

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -3

Query: 570 IMKCDVDIRKDLYANTVLSGG 508
           + KC +D+RK L+ N +L+GG
Sbjct: 198 VSKCPIDLRKKLFPNILLTGG 218


>U41017-5|AAC48216.2|  495|Caenorhabditis elegans C.elegans homeobox
           protein 21 protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -3

Query: 384 RSSPPSLPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQPGPAAQ 241
           +SS     S+ CGS   ST++++ P YT    + T    L++  P  Q
Sbjct: 210 QSSTTVRASSTCGSSVSSTSTVSSPDYTAKKGRATETPKLEELAPKKQ 257


>AJ427855-1|CAD20808.1|  495|Caenorhabditis elegans CEH-21 protein
           protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -3

Query: 384 RSSPPSLPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQPGPAAQ 241
           +SS     S+ CGS   ST++++ P YT    + T    L++  P  Q
Sbjct: 210 QSSTTVRASSTCGSSVSSTSTVSSPDYTAKKGRATETPKLEELAPKKQ 257


>AL032654-9|CAA21720.1|  404|Caenorhabditis elegans Hypothetical
           protein Y52B11A.9 protein.
          Length = 404

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -2

Query: 415 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 254
           +RK  V   G   A +S F    + K++ DE GPS   RK       S  PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265


>U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug
           resistance related protein1 protein.
          Length = 1540

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
 Frame = -2

Query: 562 VRRGHP*GLVRQHRIVRWTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 383
           + + HP  L+   +  ++T +  G    M   +  +AP  ++  I    ++   +WIG S
Sbjct: 279 IPKNHPSILIPIFKTYKFTLLAGGCYKLMFDLLQFVAPELLRQLISFIEDKNQPMWIGVS 338

Query: 382 I--LASLSTFQQMWISKQEYDE 323
           I  L  LS+  Q  I  Q + E
Sbjct: 339 IALLMFLSSLLQSMILHQYFHE 360


>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug
           resistance protein familyprotein 1, isoform e protein.
          Length = 1534

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
 Frame = -2

Query: 562 VRRGHP*GLVRQHRIVRWTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 383
           + + HP  L+   +  ++T +  G    M   +  +AP  ++  I    ++   +WIG S
Sbjct: 279 IPKNHPSILIPIFKTYKFTLLAGGCYKLMFDLLQFVAPELLRQLISFIEDKNQPMWIGVS 338

Query: 382 I--LASLSTFQQMWISKQEYDE 323
           I  L  LS+  Q  I  Q + E
Sbjct: 339 IALLMFLSSLLQSMILHQYFHE 360


>U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug
           resistance protein familyprotein 1, isoform c protein.
          Length = 1534

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
 Frame = -2

Query: 562 VRRGHP*GLVRQHRIVRWTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 383
           + + HP  L+   +  ++T +  G    M   +  +AP  ++  I    ++   +WIG S
Sbjct: 279 IPKNHPSILIPIFKTYKFTLLAGGCYKLMFDLLQFVAPELLRQLISFIEDKNQPMWIGVS 338

Query: 382 I--LASLSTFQQMWISKQEYDE 323
           I  L  LS+  Q  I  Q + E
Sbjct: 339 IALLMFLSSLLQSMILHQYFHE 360


>U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug
           resistance protein familyprotein 1, isoform b protein.
          Length = 1534

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
 Frame = -2

Query: 562 VRRGHP*GLVRQHRIVRWTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 383
           + + HP  L+   +  ++T +  G    M   +  +AP  ++  I    ++   +WIG S
Sbjct: 279 IPKNHPSILIPIFKTYKFTLLAGGCYKLMFDLLQFVAPELLRQLISFIEDKNQPMWIGVS 338

Query: 382 I--LASLSTFQQMWISKQEYDE 323
           I  L  LS+  Q  I  Q + E
Sbjct: 339 IALLMFLSSLLQSMILHQYFHE 360


>U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug
           resistance protein familyprotein 1, isoform a protein.
          Length = 1528

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
 Frame = -2

Query: 562 VRRGHP*GLVRQHRIVRWTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 383
           + + HP  L+   +  ++T +  G    M   +  +AP  ++  I    ++   +WIG S
Sbjct: 279 IPKNHPSILIPIFKTYKFTLLAGGCYKLMFDLLQFVAPELLRQLISFIEDKNQPMWIGVS 338

Query: 382 I--LASLSTFQQMWISKQEYDE 323
           I  L  LS+  Q  I  Q + E
Sbjct: 339 IALLMFLSSLLQSMILHQYFHE 360


>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
           resistance-associatedprotein protein.
          Length = 1534

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
 Frame = -2

Query: 562 VRRGHP*GLVRQHRIVRWTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 383
           + + HP  L+   +  ++T +  G    M   +  +AP  ++  I    ++   +WIG S
Sbjct: 279 IPKNHPSILIPIFKTYKFTLLAGGCYKLMFDLLQFVAPELLRQLISFIEDKNQPMWIGVS 338

Query: 382 I--LASLSTFQQMWISKQEYDE 323
           I  L  LS+  Q  I  Q + E
Sbjct: 339 IALLMFLSSLLQSMILHQYFHE 360


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,416,444
Number of Sequences: 27780
Number of extensions: 284511
Number of successful extensions: 825
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -