Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1146
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   1.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   9.6  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = -3

Query: 385 MIYESENVRNLIHHY*YYGWRKVNLFFTFAC*SQQWLTQL-VFYLIEQFLRPY 230
           +IY  +NV+ L   Y     + + L        Q W+ QL +  L +Q LR +
Sbjct: 171 LIYIDDNVKGLGKQYNIASSKTLKLSINIISLVQLWIFQLYLLILCDQILREF 223


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 603 HTTHLMVSGYRRPWTSAMPGAEPS 674
           +T H+   G+  P+T  M G E S
Sbjct: 486 YTIHMGYHGFHNPFTCNMCGVECS 509


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/41 (21%), Positives = 18/41 (43%)
 Frame = +3

Query: 432 WHLNRGRRPLLTYYNFSVRTQSLFTYIRCNYAKLLIILSVI 554
           W +        +Y NFSV    + T +      +L+I++ +
Sbjct: 58  WSIFNKWNQFRSYSNFSVFLFDIITIVTLTSTSILLIVNAV 98


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 521 LRETINHLICHLV*SNFIFFIAFVGI 598
           L  +IN+ IC  + S  +F ++ +G+
Sbjct: 41  LNLSINYCICGYIFSAILFSLSILGL 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,652
Number of Sequences: 336
Number of extensions: 4082
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)