Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1145
(600 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0227 + 12979635-12980363,12980439-12980474,12980604-129808... 33 0.17
03_05_0899 - 28619081-28619208,28619309-28619369,28619936-286200... 33 0.17
03_02_0210 - 6425708-6425863,6425955-6426114,6426204-6426295,642... 33 0.23
04_04_1445 - 33658355-33658417,33658536-33658669,33659056-336591... 32 0.31
08_02_0487 + 17691963-17692048,17693337-17693448,17694128-176943... 30 1.2
01_02_0048 - 10626467-10627498,10628522-10628617 30 1.2
09_06_0282 - 22017474-22017484,22017681-22018473,22018918-22019094 29 2.2
01_03_0271 + 14454681-14456949,14457222-14457476,14458800-144588... 29 2.2
11_04_0172 - 14474674-14474761,14474842-14475012,14475090-144755... 29 2.8
04_04_0869 - 28883688-28884983 29 2.8
02_05_0661 - 30693701-30693853,30694037-30694196,30694290-306943... 29 2.8
10_07_0097 - 12837998-12838336,12839201-12839317,12839737-128398... 28 5.0
08_01_0789 + 7640021-7640382,7643435-7643480,7644514-7644638,764... 28 5.0
05_04_0357 + 20602830-20602848,20604210-20604250,20605770-206065... 28 5.0
02_02_0252 + 8323087-8323523,8323929-8324019,8324155-8324281,832... 28 6.6
01_06_0166 + 27145250-27145778,27146062-27146516 28 6.6
12_01_0344 + 2647044-2647238,2647452-2647553,2647789-2647911,264... 27 8.7
06_01_0335 + 2412766-2415655,2416108-2416208,2416871-2416895,241... 27 8.7
04_04_0468 - 25447774-25447945,25449016-25449130,25449541-254498... 27 8.7
02_05_0354 - 28245422-28245844 27 8.7
01_06_0725 + 31508156-31508277,31508950-31509118,31509311-315094... 27 8.7
>04_03_0227 +
12979635-12980363,12980439-12980474,12980604-12980873,
12980962-12981099,12981347-12981795,12981885-12982055,
12982136-12982370
Length = 675
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +2
Query: 263 PPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASADRI 442
PP + +S PP+ +D + + G K+K LA + + + PP+HPA
Sbjct: 408 PPAKRSKRAKSSPPK--LDTSRKAARTGRGKIKVPLAPKKLDLGKAPIAPPNHPAEFTLG 465
Query: 443 QSLFNDIELY 472
+L D L+
Sbjct: 466 MALVGDDALF 475
>03_05_0899 -
28619081-28619208,28619309-28619369,28619936-28620095,
28620200-28620237,28620341-28620394,28620562-28620636,
28620744-28620872,28621172-28621259,28621340-28621446,
28621547-28621595,28621683-28621786,28622019-28622133,
28622517-28622596
Length = 395
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +2
Query: 254 GPAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASA 433
GP P A RDI+DAH I + G A + WE ++GP ++
Sbjct: 179 GPQGPYYCAAGADKSYGRDIVDAHYKACLFAGINISGINAEVMPGQWEFQIGPVVGVSAG 238
Query: 434 DRI 442
D +
Sbjct: 239 DHV 241
>03_02_0210 -
6425708-6425863,6425955-6426114,6426204-6426295,
6426490-6426564,6426701-6426829,6427312-6427375,
6427761-6427867,6428795-6428843,6428955-6429058,
6429166-6429205,6429492-6429565
Length = 349
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +2
Query: 257 PAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASAD 436
P P AA E++ RDI+DAH I + G + WE +VGP A+AD
Sbjct: 146 PGPYYCAAGAEKAFG-RDIVDAHYKACIYAGINISGINGEVMPGQWEFQVGPSVGIAAAD 204
Query: 437 RI 442
++
Sbjct: 205 QV 206
>04_04_1445 - 33658355-33658417,33658536-33658669,33659056-33659116,
33659197-33659356,33660032-33660081,33662237-33662290,
33662630-33662704,33662821-33662949,33663065-33663152,
33663266-33663372,33663513-33663561,33663657-33663760,
33663941-33663980,33664409-33664659,33664674-33664686,
33665846-33666355,33666437-33667657,33667973-33668221,
33668305-33668531
Length = 1194
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +2
Query: 254 GPAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASA 433
GP P A RDI DAH I + GT + WE +VGP +
Sbjct: 951 GPQGPYYCAVGSDKSFGRDISDAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIEAG 1010
Query: 434 DRI 442
D I
Sbjct: 1011 DHI 1013
>08_02_0487 +
17691963-17692048,17693337-17693448,17694128-17694314,
17694848-17695347,17695480-17695593,17696065-17696220,
17696306-17696395
Length = 414
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 323 HKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASADRIQSLFNDI 463
H+ NKQ +I+ +G + +S+ + P HP DRI L ND+
Sbjct: 107 HQKNKQGQIIQAEGNVQGTSSSSHK----EPSHPHGKDRISELPNDL 149
>01_02_0048 - 10626467-10627498,10628522-10628617
Length = 375
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 161 ICSTSLLRQSSCAYCTRCIL*MGPEP 84
+CS+ LL + YC C L +GPEP
Sbjct: 75 LCSSCLLLEYRSFYCCCCFLLLGPEP 100
>09_06_0282 - 22017474-22017484,22017681-22018473,22018918-22019094
Length = 326
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 192 CDVGSHSSYWHL*YVFASAKFLRILHSLHSLNGS 91
CD G H Y +F S++ + LH HS NGS
Sbjct: 65 CDGGGHEHYIIAALMFDSSRKMYDLHRFHSKNGS 98
>01_03_0271 +
14454681-14456949,14457222-14457476,14458800-14458864,
14459053-14459171,14459270-14459324
Length = 920
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = +3
Query: 363 ALWQGRLRALGSAAWGLPIIQHLPIASRAYSTTSNCIPLRHRYSRCWYATTVCASQIAHS 542
A W L L A IQ+LP+ + T + + + S C C + H+
Sbjct: 316 ASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIHA 375
Query: 543 H-IRRIL 560
+ IRR +
Sbjct: 376 YFIRRFI 382
>11_04_0172 -
14474674-14474761,14474842-14475012,14475090-14475517,
14478824-14478961,14479048-14479482,14479559-14479783,
14479860-14480159
Length = 594
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +2
Query: 257 PAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASAD 436
P PP + +S PP+ +D + G K+K LA + + V PP PA
Sbjct: 370 PPPPAKRSKRVKSSPPK--LDTRRKAAGTGRGKIKVPLAPKKLDLGKAPVAPPKPPAEFT 427
Query: 437 RIQSLFNDIELY 472
L D L+
Sbjct: 428 LGMPLVGDDALF 439
>04_04_0869 - 28883688-28884983
Length = 431
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 257 PAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASA 391
PAPP +D P A K+ K+NG ++A VASA
Sbjct: 378 PAPPADTPDMSPADAPAGEEAADKAEKKNGATAAATSVAATVASA 422
>02_05_0661 -
30693701-30693853,30694037-30694196,30694290-30694381,
30694469-30694543,30694671-30694799,30694916-30695003,
30695118-30695224,30695645-30695693,30695802-30695905,
30696108-30696147,30696838-30696911
Length = 356
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = +2
Query: 254 GPAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASA 433
GP P RDI+D+H I + G + WE +VGP ++
Sbjct: 152 GPQGPYYCGIGADKSFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAG 211
Query: 434 DRI 442
D++
Sbjct: 212 DQV 214
>10_07_0097 -
12837998-12838336,12839201-12839317,12839737-12839868,
12840656-12840907
Length = 279
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 284 FEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVAS 388
F + + PRD++D K ++NG+ + T R A+
Sbjct: 207 FREMELPRDMVDIEKELQKNGIKPMTNTAKRRAAA 241
>08_01_0789 +
7640021-7640382,7643435-7643480,7644514-7644638,
7645028-7645092,7647642-7648186
Length = 380
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 148 DVLQMPVRRVTPDITRIRASRLLSERQSRVAWNPLWSSAA 267
D L++ ++ + R + L ER+ RV W+ LW S+A
Sbjct: 191 DGLELTRKQGPVNSERDEGAELYCERKKRVKWHQLWPSSA 230
>05_04_0357 +
20602830-20602848,20604210-20604250,20605770-20606519,
20606603-20606834,20607412-20607491,20607981-20608106
Length = 415
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 590 EHRRSSAANTQNSPNVRVSDLRRAHC 513
+H + AN ++ N+ S LRR+HC
Sbjct: 91 DHASNGYANAKSGTNITKSSLRRSHC 116
>02_02_0252 +
8323087-8323523,8323929-8324019,8324155-8324281,
8324469-8324623
Length = 269
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 103 RMQRVQYAQELCRSKDVLQMPVRRVTPDITRIRASRLL 216
R++++QY EL RS LQM V ++P + + R L
Sbjct: 158 RVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSL 195
>01_06_0166 + 27145250-27145778,27146062-27146516
Length = 327
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -1
Query: 465 SMSLNRLWMRSADAG*SGGPTRHSQALATSLAKVPFNLIIPFC 337
S + R W R ADAG S S + T LA PF + +C
Sbjct: 165 SAAWRRGWQREADAGESLAVPLASSMMTTLLALFPFLKALSWC 207
>12_01_0344 +
2647044-2647238,2647452-2647553,2647789-2647911,
2648066-2648183,2649022-2649347
Length = 287
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 516 LSWHTSISNTCVLVGYNSMSLNRLWMRSADAG 421
L W + SN C L S+ LNR W S+D G
Sbjct: 234 LWWSKAASNACQL---QSLPLNRNWRLSSDGG 262
>06_01_0335 + 2412766-2415655,2416108-2416208,2416871-2416895,
2416977-2417049,2417191-2417373,2418164-2418227,
2418427-2418447,2418862-2418905,2420575-2420650,
2421359-2421373
Length = 1163
Score = 27.5 bits (58), Expect = 8.7
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Frame = +2
Query: 287 EQSDPPRDIIDAHKSNKQNGMIKLKGT-LAREVASAWECRVGP-----PDHPASADR-IQ 445
E++ P + I+ ++G+I +K +E++ W C V + A+ +R +
Sbjct: 865 ERTSPQMETIEISHCRLESGIIGIKHLPKLKEISLRWNCEVARLGQLLEEVKANPNRPVL 924
Query: 446 SLFNDIELYPT-KTQVFEMLVCHDSVRVANRSLSHSENSACLQLSYAGAQ 592
L+ND + TQ + N S N AC++ Y GAQ
Sbjct: 925 LLYNDPSKHDLGDTQEGSGTPVEANEPPKNVGESSQSNQACVEFEYNGAQ 974
>04_04_0468 - 25447774-25447945,25449016-25449130,25449541-25449877,
25450299-25450628,25451090-25451362,25451471-25451929,
25452307-25452516,25452617-25452828,25453304-25453404,
25453584-25454008,25454167-25454360,25454436-25454701,
25454809-25455015,25455121-25455281,25455741-25455933,
25456158-25456251,25457238-25457373,25458074-25458202,
25458315-25458449,25458549-25458613,25459875-25459950,
25460775-25460885,25461194-25461371,25462340-25462434
Length = 1557
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -3
Query: 166 LASVVRLCFGKVLAHIALAAFFKWVLNLLLLPDTLKIAPSISTPLR 29
L +V C G VL + W + L+LL L A + P+R
Sbjct: 1242 LGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMR 1287
>02_05_0354 - 28245422-28245844
Length = 140
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 370 GKGGCERLGVPRGASRSSSICRSH-PEPIQRHRIVSH*DTGIRDAGMPR 513
G GG R + R R S++ + H P RHR H +TG ++G R
Sbjct: 79 GDGGWRRWWLWRWQWRLSTVVQGHHPRLTVRHRRQRHVETGKEESGCGR 127
>01_06_0725 +
31508156-31508277,31508950-31509118,31509311-31509406,
31510037-31510097,31510387-31510451,31511104-31511178,
31511276-31511351,31512140-31512303,31512398-31512421
Length = 283
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 587 HRRSSAANTQNSPNVRVSDLRRAHCRGI 504
H + T+N P +R D+RR C G+
Sbjct: 59 HHEALLDRTKNKPGIRAVDVRRRCCPGV 86
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,433,078
Number of Sequences: 37544
Number of extensions: 424590
Number of successful extensions: 1222
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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