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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1145
         (600 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0227 + 12979635-12980363,12980439-12980474,12980604-129808...    33   0.17 
03_05_0899 - 28619081-28619208,28619309-28619369,28619936-286200...    33   0.17 
03_02_0210 - 6425708-6425863,6425955-6426114,6426204-6426295,642...    33   0.23 
04_04_1445 - 33658355-33658417,33658536-33658669,33659056-336591...    32   0.31 
08_02_0487 + 17691963-17692048,17693337-17693448,17694128-176943...    30   1.2  
01_02_0048 - 10626467-10627498,10628522-10628617                       30   1.2  
09_06_0282 - 22017474-22017484,22017681-22018473,22018918-22019094     29   2.2  
01_03_0271 + 14454681-14456949,14457222-14457476,14458800-144588...    29   2.2  
11_04_0172 - 14474674-14474761,14474842-14475012,14475090-144755...    29   2.8  
04_04_0869 - 28883688-28884983                                         29   2.8  
02_05_0661 - 30693701-30693853,30694037-30694196,30694290-306943...    29   2.8  
10_07_0097 - 12837998-12838336,12839201-12839317,12839737-128398...    28   5.0  
08_01_0789 + 7640021-7640382,7643435-7643480,7644514-7644638,764...    28   5.0  
05_04_0357 + 20602830-20602848,20604210-20604250,20605770-206065...    28   5.0  
02_02_0252 + 8323087-8323523,8323929-8324019,8324155-8324281,832...    28   6.6  
01_06_0166 + 27145250-27145778,27146062-27146516                       28   6.6  
12_01_0344 + 2647044-2647238,2647452-2647553,2647789-2647911,264...    27   8.7  
06_01_0335 + 2412766-2415655,2416108-2416208,2416871-2416895,241...    27   8.7  
04_04_0468 - 25447774-25447945,25449016-25449130,25449541-254498...    27   8.7  
02_05_0354 - 28245422-28245844                                         27   8.7  
01_06_0725 + 31508156-31508277,31508950-31509118,31509311-315094...    27   8.7  

>04_03_0227 +
           12979635-12980363,12980439-12980474,12980604-12980873,
           12980962-12981099,12981347-12981795,12981885-12982055,
           12982136-12982370
          Length = 675

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = +2

Query: 263 PPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASADRI 442
           PP   +   +S PP+  +D  +   + G  K+K  LA +     +  + PP+HPA     
Sbjct: 408 PPAKRSKRAKSSPPK--LDTSRKAARTGRGKIKVPLAPKKLDLGKAPIAPPNHPAEFTLG 465

Query: 443 QSLFNDIELY 472
            +L  D  L+
Sbjct: 466 MALVGDDALF 475


>03_05_0899 -
           28619081-28619208,28619309-28619369,28619936-28620095,
           28620200-28620237,28620341-28620394,28620562-28620636,
           28620744-28620872,28621172-28621259,28621340-28621446,
           28621547-28621595,28621683-28621786,28622019-28622133,
           28622517-28622596
          Length = 395

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 18/63 (28%), Positives = 26/63 (41%)
 Frame = +2

Query: 254 GPAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASA 433
           GP  P   A        RDI+DAH        I + G  A  +   WE ++GP    ++ 
Sbjct: 179 GPQGPYYCAAGADKSYGRDIVDAHYKACLFAGINISGINAEVMPGQWEFQIGPVVGVSAG 238

Query: 434 DRI 442
           D +
Sbjct: 239 DHV 241


>03_02_0210 -
           6425708-6425863,6425955-6426114,6426204-6426295,
           6426490-6426564,6426701-6426829,6427312-6427375,
           6427761-6427867,6428795-6428843,6428955-6429058,
           6429166-6429205,6429492-6429565
          Length = 349

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = +2

Query: 257 PAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASAD 436
           P P   AA  E++   RDI+DAH        I + G     +   WE +VGP    A+AD
Sbjct: 146 PGPYYCAAGAEKAFG-RDIVDAHYKACIYAGINISGINGEVMPGQWEFQVGPSVGIAAAD 204

Query: 437 RI 442
           ++
Sbjct: 205 QV 206


>04_04_1445 - 33658355-33658417,33658536-33658669,33659056-33659116,
            33659197-33659356,33660032-33660081,33662237-33662290,
            33662630-33662704,33662821-33662949,33663065-33663152,
            33663266-33663372,33663513-33663561,33663657-33663760,
            33663941-33663980,33664409-33664659,33664674-33664686,
            33665846-33666355,33666437-33667657,33667973-33668221,
            33668305-33668531
          Length = 1194

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 20/63 (31%), Positives = 24/63 (38%)
 Frame = +2

Query: 254  GPAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASA 433
            GP  P   A        RDI DAH        I + GT    +   WE +VGP     + 
Sbjct: 951  GPQGPYYCAVGSDKSFGRDISDAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIEAG 1010

Query: 434  DRI 442
            D I
Sbjct: 1011 DHI 1013


>08_02_0487 +
           17691963-17692048,17693337-17693448,17694128-17694314,
           17694848-17695347,17695480-17695593,17696065-17696220,
           17696306-17696395
          Length = 414

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +2

Query: 323 HKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASADRIQSLFNDI 463
           H+ NKQ  +I+ +G +    +S+ +     P HP   DRI  L ND+
Sbjct: 107 HQKNKQGQIIQAEGNVQGTSSSSHK----EPSHPHGKDRISELPNDL 149


>01_02_0048 - 10626467-10627498,10628522-10628617
          Length = 375

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 161 ICSTSLLRQSSCAYCTRCIL*MGPEP 84
           +CS+ LL +    YC  C L +GPEP
Sbjct: 75  LCSSCLLLEYRSFYCCCCFLLLGPEP 100


>09_06_0282 - 22017474-22017484,22017681-22018473,22018918-22019094
          Length = 326

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 192 CDVGSHSSYWHL*YVFASAKFLRILHSLHSLNGS 91
           CD G H  Y     +F S++ +  LH  HS NGS
Sbjct: 65  CDGGGHEHYIIAALMFDSSRKMYDLHRFHSKNGS 98


>01_03_0271 +
           14454681-14456949,14457222-14457476,14458800-14458864,
           14459053-14459171,14459270-14459324
          Length = 920

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = +3

Query: 363 ALWQGRLRALGSAAWGLPIIQHLPIASRAYSTTSNCIPLRHRYSRCWYATTVCASQIAHS 542
           A W   L  L  A      IQ+LP+    +  T + +   +  S C      C +   H+
Sbjct: 316 ASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIHA 375

Query: 543 H-IRRIL 560
           + IRR +
Sbjct: 376 YFIRRFI 382


>11_04_0172 -
           14474674-14474761,14474842-14475012,14475090-14475517,
           14478824-14478961,14479048-14479482,14479559-14479783,
           14479860-14480159
          Length = 594

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 20/72 (27%), Positives = 29/72 (40%)
 Frame = +2

Query: 257 PAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASAD 436
           P PP   +   +S PP+  +D  +     G  K+K  LA +     +  V PP  PA   
Sbjct: 370 PPPPAKRSKRVKSSPPK--LDTRRKAAGTGRGKIKVPLAPKKLDLGKAPVAPPKPPAEFT 427

Query: 437 RIQSLFNDIELY 472
               L  D  L+
Sbjct: 428 LGMPLVGDDALF 439


>04_04_0869 - 28883688-28884983
          Length = 431

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 257 PAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASA 391
           PAPP        +D P     A K+ K+NG      ++A  VASA
Sbjct: 378 PAPPADTPDMSPADAPAGEEAADKAEKKNGATAAATSVAATVASA 422


>02_05_0661 -
           30693701-30693853,30694037-30694196,30694290-30694381,
           30694469-30694543,30694671-30694799,30694916-30695003,
           30695118-30695224,30695645-30695693,30695802-30695905,
           30696108-30696147,30696838-30696911
          Length = 356

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/63 (25%), Positives = 25/63 (39%)
 Frame = +2

Query: 254 GPAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASA 433
           GP  P            RDI+D+H        I + G     +   WE +VGP    ++ 
Sbjct: 152 GPQGPYYCGIGADKSFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAG 211

Query: 434 DRI 442
           D++
Sbjct: 212 DQV 214


>10_07_0097 -
           12837998-12838336,12839201-12839317,12839737-12839868,
           12840656-12840907
          Length = 279

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 284 FEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVAS 388
           F + + PRD++D  K  ++NG+  +  T  R  A+
Sbjct: 207 FREMELPRDMVDIEKELQKNGIKPMTNTAKRRAAA 241


>08_01_0789 +
           7640021-7640382,7643435-7643480,7644514-7644638,
           7645028-7645092,7647642-7648186
          Length = 380

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 148 DVLQMPVRRVTPDITRIRASRLLSERQSRVAWNPLWSSAA 267
           D L++  ++   +  R   + L  ER+ RV W+ LW S+A
Sbjct: 191 DGLELTRKQGPVNSERDEGAELYCERKKRVKWHQLWPSSA 230


>05_04_0357 +
           20602830-20602848,20604210-20604250,20605770-20606519,
           20606603-20606834,20607412-20607491,20607981-20608106
          Length = 415

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 590 EHRRSSAANTQNSPNVRVSDLRRAHC 513
           +H  +  AN ++  N+  S LRR+HC
Sbjct: 91  DHASNGYANAKSGTNITKSSLRRSHC 116


>02_02_0252 +
           8323087-8323523,8323929-8324019,8324155-8324281,
           8324469-8324623
          Length = 269

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 103 RMQRVQYAQELCRSKDVLQMPVRRVTPDITRIRASRLL 216
           R++++QY  EL RS   LQM V  ++P +  +   R L
Sbjct: 158 RVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSL 195


>01_06_0166 + 27145250-27145778,27146062-27146516
          Length = 327

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = -1

Query: 465 SMSLNRLWMRSADAG*SGGPTRHSQALATSLAKVPFNLIIPFC 337
           S +  R W R ADAG S      S  + T LA  PF   + +C
Sbjct: 165 SAAWRRGWQREADAGESLAVPLASSMMTTLLALFPFLKALSWC 207


>12_01_0344 +
           2647044-2647238,2647452-2647553,2647789-2647911,
           2648066-2648183,2649022-2649347
          Length = 287

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -1

Query: 516 LSWHTSISNTCVLVGYNSMSLNRLWMRSADAG 421
           L W  + SN C L    S+ LNR W  S+D G
Sbjct: 234 LWWSKAASNACQL---QSLPLNRNWRLSSDGG 262


>06_01_0335 + 2412766-2415655,2416108-2416208,2416871-2416895,
            2416977-2417049,2417191-2417373,2418164-2418227,
            2418427-2418447,2418862-2418905,2420575-2420650,
            2421359-2421373
          Length = 1163

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
 Frame = +2

Query: 287  EQSDPPRDIIDAHKSNKQNGMIKLKGT-LAREVASAWECRVGP-----PDHPASADR-IQ 445
            E++ P  + I+      ++G+I +K     +E++  W C V        +  A+ +R + 
Sbjct: 865  ERTSPQMETIEISHCRLESGIIGIKHLPKLKEISLRWNCEVARLGQLLEEVKANPNRPVL 924

Query: 446  SLFNDIELYPT-KTQVFEMLVCHDSVRVANRSLSHSENSACLQLSYAGAQ 592
             L+ND   +    TQ         +    N   S   N AC++  Y GAQ
Sbjct: 925  LLYNDPSKHDLGDTQEGSGTPVEANEPPKNVGESSQSNQACVEFEYNGAQ 974


>04_04_0468 - 25447774-25447945,25449016-25449130,25449541-25449877,
            25450299-25450628,25451090-25451362,25451471-25451929,
            25452307-25452516,25452617-25452828,25453304-25453404,
            25453584-25454008,25454167-25454360,25454436-25454701,
            25454809-25455015,25455121-25455281,25455741-25455933,
            25456158-25456251,25457238-25457373,25458074-25458202,
            25458315-25458449,25458549-25458613,25459875-25459950,
            25460775-25460885,25461194-25461371,25462340-25462434
          Length = 1557

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = -3

Query: 166  LASVVRLCFGKVLAHIALAAFFKWVLNLLLLPDTLKIAPSISTPLR 29
            L  +V  C G VL        + W + L+LL   L  A   + P+R
Sbjct: 1242 LGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMR 1287


>02_05_0354 - 28245422-28245844
          Length = 140

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +1

Query: 370 GKGGCERLGVPRGASRSSSICRSH-PEPIQRHRIVSH*DTGIRDAGMPR 513
           G GG  R  + R   R S++ + H P    RHR   H +TG  ++G  R
Sbjct: 79  GDGGWRRWWLWRWQWRLSTVVQGHHPRLTVRHRRQRHVETGKEESGCGR 127


>01_06_0725 +
           31508156-31508277,31508950-31509118,31509311-31509406,
           31510037-31510097,31510387-31510451,31511104-31511178,
           31511276-31511351,31512140-31512303,31512398-31512421
          Length = 283

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 587 HRRSSAANTQNSPNVRVSDLRRAHCRGI 504
           H  +    T+N P +R  D+RR  C G+
Sbjct: 59  HHEALLDRTKNKPGIRAVDVRRRCCPGV 86


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,433,078
Number of Sequences: 37544
Number of extensions: 424590
Number of successful extensions: 1222
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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