BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1145 (600 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_03_0227 + 12979635-12980363,12980439-12980474,12980604-129808... 33 0.17 03_05_0899 - 28619081-28619208,28619309-28619369,28619936-286200... 33 0.17 03_02_0210 - 6425708-6425863,6425955-6426114,6426204-6426295,642... 33 0.23 04_04_1445 - 33658355-33658417,33658536-33658669,33659056-336591... 32 0.31 08_02_0487 + 17691963-17692048,17693337-17693448,17694128-176943... 30 1.2 01_02_0048 - 10626467-10627498,10628522-10628617 30 1.2 09_06_0282 - 22017474-22017484,22017681-22018473,22018918-22019094 29 2.2 01_03_0271 + 14454681-14456949,14457222-14457476,14458800-144588... 29 2.2 11_04_0172 - 14474674-14474761,14474842-14475012,14475090-144755... 29 2.8 04_04_0869 - 28883688-28884983 29 2.8 02_05_0661 - 30693701-30693853,30694037-30694196,30694290-306943... 29 2.8 10_07_0097 - 12837998-12838336,12839201-12839317,12839737-128398... 28 5.0 08_01_0789 + 7640021-7640382,7643435-7643480,7644514-7644638,764... 28 5.0 05_04_0357 + 20602830-20602848,20604210-20604250,20605770-206065... 28 5.0 02_02_0252 + 8323087-8323523,8323929-8324019,8324155-8324281,832... 28 6.6 01_06_0166 + 27145250-27145778,27146062-27146516 28 6.6 12_01_0344 + 2647044-2647238,2647452-2647553,2647789-2647911,264... 27 8.7 06_01_0335 + 2412766-2415655,2416108-2416208,2416871-2416895,241... 27 8.7 04_04_0468 - 25447774-25447945,25449016-25449130,25449541-254498... 27 8.7 02_05_0354 - 28245422-28245844 27 8.7 01_06_0725 + 31508156-31508277,31508950-31509118,31509311-315094... 27 8.7 >04_03_0227 + 12979635-12980363,12980439-12980474,12980604-12980873, 12980962-12981099,12981347-12981795,12981885-12982055, 12982136-12982370 Length = 675 Score = 33.1 bits (72), Expect = 0.17 Identities = 19/70 (27%), Positives = 32/70 (45%) Frame = +2 Query: 263 PPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASADRI 442 PP + +S PP+ +D + + G K+K LA + + + PP+HPA Sbjct: 408 PPAKRSKRAKSSPPK--LDTSRKAARTGRGKIKVPLAPKKLDLGKAPIAPPNHPAEFTLG 465 Query: 443 QSLFNDIELY 472 +L D L+ Sbjct: 466 MALVGDDALF 475 >03_05_0899 - 28619081-28619208,28619309-28619369,28619936-28620095, 28620200-28620237,28620341-28620394,28620562-28620636, 28620744-28620872,28621172-28621259,28621340-28621446, 28621547-28621595,28621683-28621786,28622019-28622133, 28622517-28622596 Length = 395 Score = 33.1 bits (72), Expect = 0.17 Identities = 18/63 (28%), Positives = 26/63 (41%) Frame = +2 Query: 254 GPAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASA 433 GP P A RDI+DAH I + G A + WE ++GP ++ Sbjct: 179 GPQGPYYCAAGADKSYGRDIVDAHYKACLFAGINISGINAEVMPGQWEFQIGPVVGVSAG 238 Query: 434 DRI 442 D + Sbjct: 239 DHV 241 >03_02_0210 - 6425708-6425863,6425955-6426114,6426204-6426295, 6426490-6426564,6426701-6426829,6427312-6427375, 6427761-6427867,6428795-6428843,6428955-6429058, 6429166-6429205,6429492-6429565 Length = 349 Score = 32.7 bits (71), Expect = 0.23 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = +2 Query: 257 PAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASAD 436 P P AA E++ RDI+DAH I + G + WE +VGP A+AD Sbjct: 146 PGPYYCAAGAEKAFG-RDIVDAHYKACIYAGINISGINGEVMPGQWEFQVGPSVGIAAAD 204 Query: 437 RI 442 ++ Sbjct: 205 QV 206 >04_04_1445 - 33658355-33658417,33658536-33658669,33659056-33659116, 33659197-33659356,33660032-33660081,33662237-33662290, 33662630-33662704,33662821-33662949,33663065-33663152, 33663266-33663372,33663513-33663561,33663657-33663760, 33663941-33663980,33664409-33664659,33664674-33664686, 33665846-33666355,33666437-33667657,33667973-33668221, 33668305-33668531 Length = 1194 Score = 32.3 bits (70), Expect = 0.31 Identities = 20/63 (31%), Positives = 24/63 (38%) Frame = +2 Query: 254 GPAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASA 433 GP P A RDI DAH I + GT + WE +VGP + Sbjct: 951 GPQGPYYCAVGSDKSFGRDISDAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIEAG 1010 Query: 434 DRI 442 D I Sbjct: 1011 DHI 1013 >08_02_0487 + 17691963-17692048,17693337-17693448,17694128-17694314, 17694848-17695347,17695480-17695593,17696065-17696220, 17696306-17696395 Length = 414 Score = 30.3 bits (65), Expect = 1.2 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = +2 Query: 323 HKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASADRIQSLFNDI 463 H+ NKQ +I+ +G + +S+ + P HP DRI L ND+ Sbjct: 107 HQKNKQGQIIQAEGNVQGTSSSSHK----EPSHPHGKDRISELPNDL 149 >01_02_0048 - 10626467-10627498,10628522-10628617 Length = 375 Score = 30.3 bits (65), Expect = 1.2 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -2 Query: 161 ICSTSLLRQSSCAYCTRCIL*MGPEP 84 +CS+ LL + YC C L +GPEP Sbjct: 75 LCSSCLLLEYRSFYCCCCFLLLGPEP 100 >09_06_0282 - 22017474-22017484,22017681-22018473,22018918-22019094 Length = 326 Score = 29.5 bits (63), Expect = 2.2 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -1 Query: 192 CDVGSHSSYWHL*YVFASAKFLRILHSLHSLNGS 91 CD G H Y +F S++ + LH HS NGS Sbjct: 65 CDGGGHEHYIIAALMFDSSRKMYDLHRFHSKNGS 98 >01_03_0271 + 14454681-14456949,14457222-14457476,14458800-14458864, 14459053-14459171,14459270-14459324 Length = 920 Score = 29.5 bits (63), Expect = 2.2 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Frame = +3 Query: 363 ALWQGRLRALGSAAWGLPIIQHLPIASRAYSTTSNCIPLRHRYSRCWYATTVCASQIAHS 542 A W L L A IQ+LP+ + T + + + S C C + H+ Sbjct: 316 ASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIHA 375 Query: 543 H-IRRIL 560 + IRR + Sbjct: 376 YFIRRFI 382 >11_04_0172 - 14474674-14474761,14474842-14475012,14475090-14475517, 14478824-14478961,14479048-14479482,14479559-14479783, 14479860-14480159 Length = 594 Score = 29.1 bits (62), Expect = 2.8 Identities = 20/72 (27%), Positives = 29/72 (40%) Frame = +2 Query: 257 PAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASAD 436 P PP + +S PP+ +D + G K+K LA + + V PP PA Sbjct: 370 PPPPAKRSKRVKSSPPK--LDTRRKAAGTGRGKIKVPLAPKKLDLGKAPVAPPKPPAEFT 427 Query: 437 RIQSLFNDIELY 472 L D L+ Sbjct: 428 LGMPLVGDDALF 439 >04_04_0869 - 28883688-28884983 Length = 431 Score = 29.1 bits (62), Expect = 2.8 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +2 Query: 257 PAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASA 391 PAPP +D P A K+ K+NG ++A VASA Sbjct: 378 PAPPADTPDMSPADAPAGEEAADKAEKKNGATAAATSVAATVASA 422 >02_05_0661 - 30693701-30693853,30694037-30694196,30694290-30694381, 30694469-30694543,30694671-30694799,30694916-30695003, 30695118-30695224,30695645-30695693,30695802-30695905, 30696108-30696147,30696838-30696911 Length = 356 Score = 29.1 bits (62), Expect = 2.8 Identities = 16/63 (25%), Positives = 25/63 (39%) Frame = +2 Query: 254 GPAPPCVAATFEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVASAWECRVGPPDHPASA 433 GP P RDI+D+H I + G + WE +VGP ++ Sbjct: 152 GPQGPYYCGIGADKSFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAG 211 Query: 434 DRI 442 D++ Sbjct: 212 DQV 214 >10_07_0097 - 12837998-12838336,12839201-12839317,12839737-12839868, 12840656-12840907 Length = 279 Score = 28.3 bits (60), Expect = 5.0 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = +2 Query: 284 FEQSDPPRDIIDAHKSNKQNGMIKLKGTLAREVAS 388 F + + PRD++D K ++NG+ + T R A+ Sbjct: 207 FREMELPRDMVDIEKELQKNGIKPMTNTAKRRAAA 241 >08_01_0789 + 7640021-7640382,7643435-7643480,7644514-7644638, 7645028-7645092,7647642-7648186 Length = 380 Score = 28.3 bits (60), Expect = 5.0 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +1 Query: 148 DVLQMPVRRVTPDITRIRASRLLSERQSRVAWNPLWSSAA 267 D L++ ++ + R + L ER+ RV W+ LW S+A Sbjct: 191 DGLELTRKQGPVNSERDEGAELYCERKKRVKWHQLWPSSA 230 >05_04_0357 + 20602830-20602848,20604210-20604250,20605770-20606519, 20606603-20606834,20607412-20607491,20607981-20608106 Length = 415 Score = 28.3 bits (60), Expect = 5.0 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -2 Query: 590 EHRRSSAANTQNSPNVRVSDLRRAHC 513 +H + AN ++ N+ S LRR+HC Sbjct: 91 DHASNGYANAKSGTNITKSSLRRSHC 116 >02_02_0252 + 8323087-8323523,8323929-8324019,8324155-8324281, 8324469-8324623 Length = 269 Score = 27.9 bits (59), Expect = 6.6 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +1 Query: 103 RMQRVQYAQELCRSKDVLQMPVRRVTPDITRIRASRLL 216 R++++QY EL RS LQM V ++P + + R L Sbjct: 158 RVRKLQYISELERSVTTLQMEVSALSPRVAFLDHQRSL 195 >01_06_0166 + 27145250-27145778,27146062-27146516 Length = 327 Score = 27.9 bits (59), Expect = 6.6 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = -1 Query: 465 SMSLNRLWMRSADAG*SGGPTRHSQALATSLAKVPFNLIIPFC 337 S + R W R ADAG S S + T LA PF + +C Sbjct: 165 SAAWRRGWQREADAGESLAVPLASSMMTTLLALFPFLKALSWC 207 >12_01_0344 + 2647044-2647238,2647452-2647553,2647789-2647911, 2648066-2648183,2649022-2649347 Length = 287 Score = 27.5 bits (58), Expect = 8.7 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = -1 Query: 516 LSWHTSISNTCVLVGYNSMSLNRLWMRSADAG 421 L W + SN C L S+ LNR W S+D G Sbjct: 234 LWWSKAASNACQL---QSLPLNRNWRLSSDGG 262 >06_01_0335 + 2412766-2415655,2416108-2416208,2416871-2416895, 2416977-2417049,2417191-2417373,2418164-2418227, 2418427-2418447,2418862-2418905,2420575-2420650, 2421359-2421373 Length = 1163 Score = 27.5 bits (58), Expect = 8.7 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 8/110 (7%) Frame = +2 Query: 287 EQSDPPRDIIDAHKSNKQNGMIKLKGT-LAREVASAWECRVGP-----PDHPASADR-IQ 445 E++ P + I+ ++G+I +K +E++ W C V + A+ +R + Sbjct: 865 ERTSPQMETIEISHCRLESGIIGIKHLPKLKEISLRWNCEVARLGQLLEEVKANPNRPVL 924 Query: 446 SLFNDIELYPT-KTQVFEMLVCHDSVRVANRSLSHSENSACLQLSYAGAQ 592 L+ND + TQ + N S N AC++ Y GAQ Sbjct: 925 LLYNDPSKHDLGDTQEGSGTPVEANEPPKNVGESSQSNQACVEFEYNGAQ 974 >04_04_0468 - 25447774-25447945,25449016-25449130,25449541-25449877, 25450299-25450628,25451090-25451362,25451471-25451929, 25452307-25452516,25452617-25452828,25453304-25453404, 25453584-25454008,25454167-25454360,25454436-25454701, 25454809-25455015,25455121-25455281,25455741-25455933, 25456158-25456251,25457238-25457373,25458074-25458202, 25458315-25458449,25458549-25458613,25459875-25459950, 25460775-25460885,25461194-25461371,25462340-25462434 Length = 1557 Score = 27.5 bits (58), Expect = 8.7 Identities = 14/46 (30%), Positives = 20/46 (43%) Frame = -3 Query: 166 LASVVRLCFGKVLAHIALAAFFKWVLNLLLLPDTLKIAPSISTPLR 29 L +V C G VL + W + L+LL L A + P+R Sbjct: 1242 LGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMR 1287 >02_05_0354 - 28245422-28245844 Length = 140 Score = 27.5 bits (58), Expect = 8.7 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = +1 Query: 370 GKGGCERLGVPRGASRSSSICRSH-PEPIQRHRIVSH*DTGIRDAGMPR 513 G GG R + R R S++ + H P RHR H +TG ++G R Sbjct: 79 GDGGWRRWWLWRWQWRLSTVVQGHHPRLTVRHRRQRHVETGKEESGCGR 127 >01_06_0725 + 31508156-31508277,31508950-31509118,31509311-31509406, 31510037-31510097,31510387-31510451,31511104-31511178, 31511276-31511351,31512140-31512303,31512398-31512421 Length = 283 Score = 27.5 bits (58), Expect = 8.7 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -2 Query: 587 HRRSSAANTQNSPNVRVSDLRRAHCRGI 504 H + T+N P +R D+RR C G+ Sbjct: 59 HHEALLDRTKNKPGIRAVDVRRRCCPGV 86 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,433,078 Number of Sequences: 37544 Number of extensions: 424590 Number of successful extensions: 1222 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 1182 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1222 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1435654836 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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