Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1145
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    25   1.9  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   3.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   10.0 
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    23   10.0 

>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 412 RPHAALPSARNLPCQSAFQFDHSILLIRLVSIDDVPR 302
           RP AA+ S    P      + H +LL+RL+  +D+P+
Sbjct: 114 RPRAAIKS----PVPEVDAYFHLLLLVRLLDKNDLPK 146


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = +1

Query: 310 HHRCSQVE*AKWNDQIERHFGKGGCERLGVPRGASRSSSICRSHPEPIQRHRI 468
           HH    V+   +++ I+  FG G C  + + RG    +   R++ +   RH +
Sbjct: 728 HHLLKNVQ--GFSNDIKMEFGIGKCRSIHLHRGQVLDADSFRANEQEEIRHMV 778


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 407 PRGTPKRSQPPLPKCL 360
           P G P  S+PPLP  L
Sbjct: 602 PLGGPAGSRPPLPNLL 617


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 354 N*KALWQGRLRALGSAAWGLPIIQHLPI 437
           N    W  R R L +AAW   I+  LPI
Sbjct: 333 NFSGCWS-RARKLVAAAWSFSILFSLPI 359


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,116
Number of Sequences: 2352
Number of extensions: 15726
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)