Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1144
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    25   2.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.0  
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    23   6.7  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   8.8  

>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = -2

Query: 287 KKTLTSVKC--CWTNGFWGFEC 228
           ++    VKC  CW  G  GFEC
Sbjct: 322 REATVQVKCFKCWKLGHKGFEC 343


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 621 PELWLELCKSISWS 662
           PELW++ CKS S S
Sbjct: 339 PELWMKNCKSCSIS 352


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 18  GFKSVVDSAKFSGSLHISSW 77
           G +  VD   F+G LH+  W
Sbjct: 105 GSEHTVDGESFAGELHLVHW 124


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 136 PRSHTADDGNSVMSLTN-KRTHDEMCN 59
           P++HT DD +S  +L N  + HD + N
Sbjct: 143 PQAHTTDDESSFDNLNNDMKGHDFIDN 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,987
Number of Sequences: 2352
Number of extensions: 10641
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)