Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1144
         (675 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl...    36   0.020
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl...    36   0.020
Z93377-11|CAM84803.1|  332|Caenorhabditis elegans Hypothetical p...    30   1.7  
Z81513-15|CAM84808.1|  332|Caenorhabditis elegans Hypothetical p...    30   1.7  
Z70752-3|CAA94755.3|  654|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U53154-11|AAC25848.1|  390|Caenorhabditis elegans Hypothetical p...    27   9.2  

>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
            methyltransferase-likeprotein 1, isoform b protein.
          Length = 1590

 Score = 36.3 bits (80), Expect = 0.020
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = -2

Query: 416  ERTMILLRLIYRNLIKRNSHTTH*DLRYHQNLQQFKKNYLK 294
            ++T  L++LIYR + KR S  +  D R+ +N  +  KNY+K
Sbjct: 1531 DKTTWLIKLIYREIFKRESAQSGFDYRFSENTDKKVKNYVK 1571


>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
            methyltransferase-likeprotein 1, isoform a protein.
          Length = 1604

 Score = 36.3 bits (80), Expect = 0.020
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = -2

Query: 416  ERTMILLRLIYRNLIKRNSHTTH*DLRYHQNLQQFKKNYLK 294
            ++T  L++LIYR + KR S  +  D R+ +N  +  KNY+K
Sbjct: 1545 DKTTWLIKLIYREIFKRESAQSGFDYRFSENTDKKVKNYVK 1585


>Z93377-11|CAM84803.1|  332|Caenorhabditis elegans Hypothetical
           protein F13A7.14 protein.
          Length = 332

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = -1

Query: 414 ENDDTTATDLSKSDKKKQPYD 352
           ++DDT+ +DLS S K K+PY+
Sbjct: 277 DDDDTSLSDLSNSSKTKKPYN 297


>Z81513-15|CAM84808.1|  332|Caenorhabditis elegans Hypothetical
           protein F13A7.14 protein.
          Length = 332

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = -1

Query: 414 ENDDTTATDLSKSDKKKQPYD 352
           ++DDT+ +DLS S K K+PY+
Sbjct: 277 DDDDTSLSDLSNSSKTKKPYN 297


>Z70752-3|CAA94755.3|  654|Caenorhabditis elegans Hypothetical
           protein F25B3.3 protein.
          Length = 654

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -1

Query: 204 PRNAKRARKMYTTKLIKFLQNICQEVTRPTTETLLCH*LIKEPTMKCVTSQ 52
           PR + R+R + T K     + +   VT PTTE   C   +  P +K +  Q
Sbjct: 560 PRGSMRSRIINTCKRSSRPRTVSAVVTSPTTEKPTCSTKLSPPKLKDIRPQ 610


>U53154-11|AAC25848.1|  390|Caenorhabditis elegans Hypothetical
           protein C33G8.2 protein.
          Length = 390

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 447 DSLLRSEKRSRENDDTTATDLSKSDKKK 364
           D  ++ +K+ +E+DD    D  K DKKK
Sbjct: 362 DDDMKKDKKKKEDDDKEDEDDKKKDKKK 389


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,351,466
Number of Sequences: 27780
Number of extensions: 243602
Number of successful extensions: 815
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)