Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1143
(626 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 24 1.2
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 22 3.7
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 21 6.4
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 21 6.4
AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. 21 6.4
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 21 6.4
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 21 6.4
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 21 8.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.4
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 21 8.4
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 8.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 8.4
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 8.4
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 21 8.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 8.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 8.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 8.4
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 21 8.4
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 8.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 8.4
AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax prot... 21 8.4
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 322 TSQDPTEHLNVNFFDFNRN 378
T PT+ V FFD NRN
Sbjct: 377 TEMSPTDISLVGFFDVNRN 395
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/28 (28%), Positives = 11/28 (39%)
Frame = +2
Query: 392 CISGPVHVESTVHSSARTIRCSCQTSTI 475
C P T H + CSC + T+
Sbjct: 226 CKPNPCQNGGTCHDLVNSFSCSCPSGTL 253
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 21.4 bits (43), Expect = 6.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYIRMLGRVL*RHKRAR 113
R +AH+LCL+ ++I I R + K R
Sbjct: 36 RIEIAHALCLTERQIKIWFQNRRMKLKKELR 66
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 21.4 bits (43), Expect = 6.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 469 YNIKAGPHGEVIRDSAVICT 528
YN+ P+G V D A IC+
Sbjct: 133 YNMITCPNGLVYNDKAGICS 152
>AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein.
Length = 256
Score = 21.4 bits (43), Expect = 6.4
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = +2
Query: 149 HPNVNFFEGETERVSKHCTHFAFSFARS*RHKTLPTSECKFL*ERES 289
HP G+ ++ +H HF SF + + +E K+ ES
Sbjct: 76 HPETEKDWGDGDKHDRHERHFESSFGNNLHSEKAKFNESKWQDSGES 122
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 21.4 bits (43), Expect = 6.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYIRMLGRVL*RHKRAR 113
R +AH+LCL+ ++I I R + K R
Sbjct: 187 RIEIAHALCLTERQIKIWFQNRRMKLKKELR 217
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 21.4 bits (43), Expect = 6.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYIRMLGRVL*RHKRAR 113
R +AH+LCL+ ++I I R + K R
Sbjct: 246 RIEIAHALCLTERQIKIWFQNRRMKLKKELR 276
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2
Query: 200 CTHFAFSFARS*RHKTLPTSE 262
CTH ++FA HK S+
Sbjct: 551 CTHIIYAFATLKDHKLAEASD 571
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 276 ERERARISASLSHVRD 323
+ E+ARI+A L +RD
Sbjct: 1251 KEEKARIAADLKELRD 1266
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 276 ERERARISASLSHVRD 323
+ E+ARI+A L +RD
Sbjct: 1251 KEEKARIAADLKELRD 1266
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYI 155
R +AH+LCL+ ++I I
Sbjct: 253 RIEMAHALCLTERQIKI 269
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYI 155
R +AH+LCL+ ++I I
Sbjct: 250 RIEIAHALCLTERQIKI 266
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYI 155
R +AH+LCL+ ++I I
Sbjct: 250 RIEIAHALCLTERQIKI 266
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYI 155
R +AH+LCL+ ++I I
Sbjct: 272 RIEIAHALCLTERQIKI 288
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 355 NFFDFNRNPLCMLYIRACT 411
NFFD R+ + + ACT
Sbjct: 324 NFFDIERSTILSVLGTACT 342
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYI 155
R +AH+LCL+ ++I I
Sbjct: 250 RIEIAHALCLTERQIKI 266
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYI 155
R +AH+LCL+ ++I I
Sbjct: 206 RIEIAHALCLTERQIKI 222
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYI 155
R +AH+LCL+ ++I I
Sbjct: 250 RIEIAHALCLTERQIKI 266
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYI 155
R +AH+LCL+ ++I I
Sbjct: 38 RIEIAHALCLTERQIKI 54
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYI 155
R +AH+LCL+ ++I I
Sbjct: 274 RIEIAHALCLTERQIKI 290
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYI 155
R +AH+LCL+ ++I I
Sbjct: 250 RIEIAHALCLTERQIKI 266
>AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax
protein.
Length = 96
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYI 155
R +AH+LCL+ ++I I
Sbjct: 35 RIEMAHALCLTERQIKI 51
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,468
Number of Sequences: 336
Number of extensions: 3310
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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