Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1143
         (626 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    27   0.37 
AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha su...    23   6.0  
AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha su...    23   6.0  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   6.0  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 27.5 bits (58), Expect = 0.37
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -1

Query: 353 TFRCSVGSCDVTNVRERCRDACSLSLKEIYIPMSVGSCDVTN 228
           T++C +  CD T   +RC   CS +++ +  P  V +C ++N
Sbjct: 517 TYKCGICECDGTYHGQRCE--CS-AMESLLEPGMVDACRMSN 555


>AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha
           subunit AgOn protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = -3

Query: 204 VQCLLT-LSVSPSKKFTFGCSVGSCDVTSVREMVRCTGRTLSFSLSLKEIYIQIMLDSPV 28
           +Q L+  L   P+    FG +   CD   V ++V+    T  FS  L     ++  DS V
Sbjct: 65  IQSLVAILRAMPNLSIAFGNNERECDAKMVFDVVQRMHDTEPFSEDLLLAMKRLWSDSGV 124

Query: 27  KSRTC 13
           +   C
Sbjct: 125 QECFC 129


>AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha
           subunit AgOa protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = -3

Query: 204 VQCLLT-LSVSPSKKFTFGCSVGSCDVTSVREMVRCTGRTLSFSLSLKEIYIQIMLDSPV 28
           +Q L+  L   P+    FG +   CD   V ++V+    T  FS  L     ++  DS V
Sbjct: 65  IQSLVAILRAMPNLSIAFGNNERECDAKMVFDVVQRMHDTEPFSEDLLLAMKRLWSDSGV 124

Query: 27  KSRTC 13
           +   C
Sbjct: 125 QECFC 129


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -1

Query: 422 WTPRVQALIYNIQSGFRLKSKKFTFRCSVGSCDVTNVRERCRDACSLSLKEIY 264
           WTP +QA+I N+    ++  +       +   ++   RE  R A  LS  E +
Sbjct: 304 WTPAIQAMIDNLSRKEQMTMRTIPPEEQL-QTELLAARESLRKAIRLSKNEAF 355


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,707
Number of Sequences: 2352
Number of extensions: 13300
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)