Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1143
         (626 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113372-1|AAM29377.1|  526|Drosophila melanogaster LP02990p pro...    31   1.7  
AE014134-48|AAF51541.1|  953|Drosophila melanogaster CG4648-PA p...    31   1.7  

>AY113372-1|AAM29377.1|  526|Drosophila melanogaster LP02990p
           protein.
          Length = 526

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -2

Query: 157 IRMLGRVL*RHKRARDGEMHRTHALLLSLSQRNLHSDYAR*SCE 26
           ++ + R++  H    D +MH T  + L+ S RNL S  AR SC+
Sbjct: 325 LKSMVRLIRYHAETLDNQMHMT-CIQLTRSVRNLRSQVARASCQ 367


>AE014134-48|AAF51541.1|  953|Drosophila melanogaster CG4648-PA
           protein.
          Length = 953

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -2

Query: 157 IRMLGRVL*RHKRARDGEMHRTHALLLSLSQRNLHSDYAR*SCE 26
           ++ + R++  H    D +MH T  + L+ S RNL S  AR SC+
Sbjct: 752 LKSMVRLIRYHAETLDNQMHMT-CIQLTRSVRNLRSQVARASCQ 794


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,359,259
Number of Sequences: 53049
Number of extensions: 613762
Number of successful extensions: 1400
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)