Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1143
(626 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 2.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 4.3
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 5.6
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 21 7.4
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 7.4
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 21 7.4
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 21 7.4
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 21 7.4
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 21 9.8
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 21 9.8
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 9.8
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.0 bits (47), Expect = 2.4
Identities = 7/38 (18%), Positives = 23/38 (60%)
Frame = +3
Query: 207 ISPSLSHVRDVTRPYRHRNVNFFERERARISASLSHVR 320
I+P + + ++P++++ + E++ +R S +S ++
Sbjct: 525 INPERAEFIEFSKPFKYQGITILEKKPSRSSTLVSFLQ 562
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = +2
Query: 374 ETRSVCCISGPVHVESTVHSSA 439
+T S+ C++G V ++H+S+
Sbjct: 290 QTNSMICLNGQVLKRESIHNSS 311
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -1
Query: 410 VQALIYNIQSGFRLKSKKFTFRCSVGSCDVT 318
+ ++YN+ S + K T RCS + +T
Sbjct: 311 INPILYNVMSAKYRNAFKETCRCSPSNPSIT 341
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYIRMLGRVL*RHKRAR 113
R +AH+LCL+ ++I I R + K R
Sbjct: 38 RIEIAHALCLTERQIKIWFQNRRMKLKKELR 68
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 537 YKASAYNS*VSYNLPVWTSLYIVLV*Q 457
YK S YN+ +YN ++ YI+ + Q
Sbjct: 89 YKYSNYNNYNNYNKKLYYKNYIINIEQ 115
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -3
Query: 204 VQCLLTLSVSPSKKFTFGCSVGSCDVTSVREMVRC 100
+ C S K G +G C +V+EM+RC
Sbjct: 239 LNCWTQTENSLEKAKQVGAFMG-CPTRNVKEMIRC 272
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -3
Query: 204 VQCLLTLSVSPSKKFTFGCSVGSCDVTSVREMVRC 100
+ C S K G +G C +V+EM+RC
Sbjct: 110 LNCWTQTENSLEKAKQVGAFMG-CPTRNVKEMIRC 143
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -3
Query: 204 VQCLLTLSVSPSKKFTFGCSVGSCDVTSVREMVRC 100
+ C S K G +G C +V+EM+RC
Sbjct: 239 LNCWTQTENSLEKAKQVGAFMG-CPTRNVKEMIRC 272
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYI 155
R +AH+LCL+ ++I I
Sbjct: 38 RIEIAHALCLTERQIKI 54
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYI 155
R +AH+LCL+ ++I I
Sbjct: 38 RIEIAHALCLTERQIKI 54
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 205 RAVLAHSLCLSLKEIYI 155
R +AH+LCL+ ++I I
Sbjct: 300 RIEIAHALCLTERQIKI 316
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,973
Number of Sequences: 438
Number of extensions: 3941
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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