Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1142
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   1.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   3.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   3.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   3.6  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   4.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   8.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    20   8.2  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 84  NENSIKEHMDTAHFGSHRLHPLARRLQWG 170
           N N+I  H+D A+ GS  + P  R L  G
Sbjct: 262 NSNNIWLHVDAAYAGSSFICPEFRYLMKG 290


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 283 LTELTDCLIGLCVLCWHCNQ*QLRLVRRLE 194
           L + T CL  L V C   +Q  L + RR++
Sbjct: 286 LVDSTYCLFLLFVFCDCSHQASLNIARRVQ 315


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 283 LTELTDCLIGLCVLCWHCNQ*QLRLVRRLE 194
           L + T CL  L V C   +Q  L + RR++
Sbjct: 286 LVDSTYCLFLLFVFCDCSHQASLNIARRVQ 315


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 283 LTELTDCLIGLCVLCWHCNQ*QLRLVRRLE 194
           L + T CL  L V C   +Q  L + RR++
Sbjct: 286 LVDSTYCLFLLFVFCDCSHQASLNIARRVQ 315


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 148 WQEGYNGEIFPYQQLA 195
           +QEG+NG+ F   Q A
Sbjct: 227 YQEGWNGQSFDVSQPA 242


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 131 TSKMSSIHMLFNRVFILT 78
           T + S IH++   VF+ T
Sbjct: 484 TKQQSKIHLIVRSVFVTT 501


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 312 NKDDEYNSSDRPRRIKI 362
           N  DEYN   RPR   I
Sbjct: 396 NNRDEYNVCFRPRNNSI 412


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 241 CWHCNQ*QLRLVRRLEPIVGMEIFPHCNLLAS 146
           CW  +     L   LEP+  +  F  CN  A+
Sbjct: 40  CWSEDMGSFSLPLDLEPLPSLFPFSPCNNTAN 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,109
Number of Sequences: 336
Number of extensions: 1874
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)