Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1142
         (410 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   4.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   4.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    20   9.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    20   9.5  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    20   9.5  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 139 YIRWQEGYNGEIF 177
           Y  W+E YNG I+
Sbjct: 431 YTDWEEVYNGYIY 443


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 139 YIRWQEGYNGEIF 177
           Y  W+E YNG I+
Sbjct: 431 YTDWEEVYNGYIY 443


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 162 VTFLPADVIDDFQNEQYP 109
           V F   D I D +NE YP
Sbjct: 7   VIFRHGDRIPDEKNEMYP 24


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 162 VTFLPADVIDDFQNEQYP 109
           V F   D I D +NE YP
Sbjct: 22  VIFRHGDRIPDEKNEMYP 39


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 165 WGNISIPTIGSKRRTSRSCHW 227
           +GN  I    S    + SCHW
Sbjct: 176 FGNRLIEESSSVMEAAYSCHW 196


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,325
Number of Sequences: 438
Number of extensions: 2052
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)