Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1141
         (444 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024763-6|AAO12403.1|  603|Caenorhabditis elegans Calpain famil...    29   1.1  
Z35595-9|CAA84638.1|  367|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AF295927-1|AAL83724.1|  377|Caenorhabditis elegans paraoxonase-l...    28   2.7  
AF003141-2|AAK21482.2|  377|Caenorhabditis elegans Mechanosensor...    28   2.7  
U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical pr...    27   4.6  
U40414-2|AAA81405.2|  634|Caenorhabditis elegans Hypothetical pr...    27   4.6  
AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical...    27   4.6  

>AC024763-6|AAO12403.1|  603|Caenorhabditis elegans Calpain family
           protein 4, isoform b protein.
          Length = 603

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -2

Query: 377 LEVGQPTSKSSWRFQVQPRLTTNSPSMYFFSFLHT 273
           +E G+ +SK SWR Q QP      PS+    FLH+
Sbjct: 566 MEDGEWSSKHSWRLQQQPIYLPQEPSI--LHFLHS 598


>Z35595-9|CAA84638.1|  367|Caenorhabditis elegans Hypothetical
           protein C01G6.9 protein.
          Length = 367

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +3

Query: 174 LISVSTPGILICSASKTATRMLELPFLFDSFEVCMQERKEI 296
           +I +      +C     ++R LEL F+ DS+  C+ E+ ++
Sbjct: 1   MIILKIAAFFLCLKFGVSSRPLELQFVCDSYHECLDEKSQL 41


>AF295927-1|AAL83724.1|  377|Caenorhabditis elegans paraoxonase-like
           protein MEC-6 protein.
          Length = 377

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 307 HHQCISFLSCIQTSKLSKRK 248
           +HQCI F   +++SKL+ RK
Sbjct: 148 NHQCIHFFQIVESSKLNHRK 167


>AF003141-2|AAK21482.2|  377|Caenorhabditis elegans Mechanosensory
           abnormality protein6 protein.
          Length = 377

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 307 HHQCISFLSCIQTSKLSKRK 248
           +HQCI F   +++SKL+ RK
Sbjct: 148 NHQCIHFFQIVESSKLNHRK 167


>U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical
           protein F53B1.2 protein.
          Length = 483

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 153 IRCATILLISVSTPGI-LICSASKTATRMLEL 245
           +RC T+L+ S+S PGI L C A    T   +L
Sbjct: 271 LRCFTMLITSLSVPGIHLQCEARPNTTMQEKL 302


>U40414-2|AAA81405.2|  634|Caenorhabditis elegans Hypothetical
           protein F53B3.2 protein.
          Length = 634

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -2

Query: 326 PRLTTNSPSMYFFSFLHTDFEAVKKER*LQHSCRSFRGG 210
           PRL TN P+ + F FL  DF+        +H+ R  R G
Sbjct: 539 PRLATNEPNTFDFVFL-DDFKRENYLDDYEHAIRLIRSG 576


>AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical
           protein Y75B8A.26 protein.
          Length = 1144

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3

Query: 159 CATILLISVSTPGILICSA 215
           C  ++LIS+STP  L+C+A
Sbjct: 710 CMILVLISISTPIFLVCAA 728


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,074,286
Number of Sequences: 27780
Number of extensions: 205098
Number of successful extensions: 588
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)