Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1139
         (665 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913...    33   0.15 
08_01_0620 - 5416197-5416225,5416333-5416652,5417144-5417235,541...    29   4.4  
07_01_0733 + 5570084-5570282,5570395-5570600,5572484-5572624,557...    29   4.4  
09_03_0096 + 12328116-12329561,12329810-12329852,12332119-123322...    28   7.7  
01_01_0351 + 2790469-2790534,2791089-2791173,2791921-2792021,279...    28   7.7  

>10_08_0101 -
           14789994-14790205,14790290-14790957,14791232-14791345,
           14794826-14794932
          Length = 366

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +2

Query: 131 CHQI*HCIQDEWKHGIY 181
           CH   HCI++EWKH IY
Sbjct: 53  CHSDLHCIKNEWKHSIY 69


>08_01_0620 -
           5416197-5416225,5416333-5416652,5417144-5417235,
           5417304-5417394,5417489-5417577,5417812-5417929,
           5418007-5418098,5418180-5418215,5418323-5418403,
           5418510-5418617,5418809-5418901,5419045-5419146,
           5419345-5419449,5419526-5419612,5419952-5420227
          Length = 572

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +2

Query: 242 SSKRADTPDSSFLSADESDDDSVGETVSKKPSTNNK 349
           + K+ D  DSS   +DESD D    T SK P+   K
Sbjct: 169 AQKKKDDSDSSESESDESDSDEDVPTKSKAPAVAAK 204


>07_01_0733 + 5570084-5570282,5570395-5570600,5572484-5572624,
            5572773-5572949,5573049-5573145,5573575-5573687,
            5573774-5573896,5574004-5574075,5575340-5575432,
            5575564-5575674,5575767-5575889,5576834-5576890,
            5576939-5577022,5577140-5577214,5577418-5577554,
            5577719-5577853,5579029-5579168,5579334-5579399,
            5579732-5579838,5579910-5579990,5580064-5580138,
            5580224-5580325,5581837-5582005,5582090-5582217,
            5582596-5582679,5582779-5582879,5583729-5583882,
            5583964-5584038,5584112-5584262,5584463-5585078,
            5585427-5585487,5585874-5586019,5586104-5586287,
            5586363-5586440,5586603-5586931,5587023-5587199,
            5587571-5587667,5587742-5587897,5587962-5588198,
            5588271-5588354,5588426-5588486,5588762-5588898
          Length = 1912

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 263  PDSSFLSADESDDDSVGETVSKKPSTNNKINRDFYTPVIKPKS 391
            PDS+  ++D+ DD+ V E +S+ P      N     P  KP+S
Sbjct: 1506 PDSTGDTSDDEDDEIVPEEISRNPVMGRDRNHALVLP--KPES 1546


>09_03_0096 +
           12328116-12329561,12329810-12329852,12332119-12332237,
           12333326-12333853
          Length = 711

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +1

Query: 493 QREFDTQTPKLFTQPTSEVKKRNVLLPFNNSTVKSL 600
           ++E + +T K  TQ  +E+KK++  L  +N+TV+ L
Sbjct: 369 KQEMEDETMKRLTQLENELKKKSGQLDRSNATVQKL 404


>01_01_0351 +
           2790469-2790534,2791089-2791173,2791921-2792021,
           2792601-2792683,2792829-2792874,2792969-2793025,
           2793118-2793172,2793244-2793344,2793432-2793495,
           2793604-2793737,2794158-2794346
          Length = 326

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
 Frame = -1

Query: 392 SIWVLLQVCRSPYLFYYL--LKASWRPFRLPNHHR 294
           S W  +  C     +Y L  + +SW   R PNH R
Sbjct: 288 SCWNFIMTCVKTVYYYILNLIVSSWENMRRPNHQR 322


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,701,058
Number of Sequences: 37544
Number of extensions: 235422
Number of successful extensions: 574
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)