Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1139
         (665 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    29   0.100
AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transpor...    25   2.8  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   3.7  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   6.5  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   8.7  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 29.5 bits (63), Expect = 0.100
 Identities = 17/75 (22%), Positives = 32/75 (42%)
 Frame = +2

Query: 146  HCIQDEWKHGIYF*QHQICSDANVSFIS*FDASSKRADTPDSSFLSADESDDDSVGETVS 325
            HC++ ++  G    + +        +   FD S   +    SS   +DESDD +   +  
Sbjct: 1889 HCVKPQYYFGNVISEQEAGRQRYNYYYKDFDLSDSSSSESSSS---SDESDDSNSSSSEE 1945

Query: 326  KKPSTNNKINRDFYT 370
            +KP+  +   +  YT
Sbjct: 1946 RKPNREHFFEKQQYT 1960


>AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transporter
           protein.
          Length = 156

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 229 ANKADIGIGANLMLLEVDSVFPLIL 155
           A  ADI    NL +L V   FPL+L
Sbjct: 21  ARGADINSSRNLYILGVSFFFPLVL 45


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -1

Query: 338 LKASWRPFRLPNHHRSRQQTKNLNQGYLLFLKRH 237
           L  S   + L + HRSRQ+++ + +G+ +   RH
Sbjct: 680 LNISKTEYILVSSHRSRQESQIIVEGHTIRSSRH 713


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 162 SGNTESTSNSIKFAPMPMSALLANLMPLQKEQIPLIQVFCLLT 290
           SG   S S SI  +      LLA ++P     +PL+  F L T
Sbjct: 267 SGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFT 309


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 248 KRADTPDSSFLSADESDDDS 307
           +R+D+  SS  S+  SDDDS
Sbjct: 42  QRSDSDSSSSESSQSSDDDS 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,604
Number of Sequences: 2352
Number of extensions: 11241
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)