Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1137
(658 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 27 0.39
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 25 2.8
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 24 3.7
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 24 3.7
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 24 4.9
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 23 6.4
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 23 8.5
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 8.5
AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein. 23 8.5
AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein. 23 8.5
AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein. 23 8.5
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 27.5 bits (58), Expect = 0.39
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +3
Query: 336 FDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWE 443
+DG Q L+ I+E+ ++ + G+++ V+W+
Sbjct: 171 YDGFQVDLRHIDEMNETNVVEVGVDLSEFYTSVEWD 206
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 24.6 bits (51), Expect = 2.8
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = -3
Query: 434 DLPGQGRHVDTLGDVDGLSQLVDVLE---GTLNTVKDGTQDTRTKFY 303
D PG+GR V DV+ L DV E G + D + DT K Y
Sbjct: 2122 DGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFLDSDMSLDTVWKVY 2168
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 24.2 bits (50), Expect = 3.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 346 IPSKMEPKIPGPSSTDKGFPVRSTGSPTVT 257
+ +K EP+ PG +T P +T PT T
Sbjct: 84 VNAKCEPQSPGDQTTTTLRPATTTLRPTTT 113
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 24.2 bits (50), Expect = 3.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 346 IPSKMEPKIPGPSSTDKGFPVRSTGSPTVT 257
+ +K EP+ PG +T P +T PT T
Sbjct: 84 VNAKCEPQSPGDQTTTTLRPATTTLRPTTT 113
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 23.8 bits (49), Expect = 4.9
Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 324 LGS-IFDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWE 443
LGS +DG + L+ ++E + S + G+++ V+W+
Sbjct: 170 LGSWTYDGFKVDLRHMDEKSGSNIVDVGVDLSEFYMSVEWD 210
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 23.4 bits (48), Expect = 6.4
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = -2
Query: 222 VTFKTDNLTDEFIVTDTDQLVHSRSGHFFGSDDGSRYGEDISE--PLLILLIGD--RPQA 55
V +TD T TDT+ ++ S D SR GE + + L+ L GD R +
Sbjct: 672 VKLETDAETAGGGATDTESVLGRAIADLVASGDDSRQGEMLRKLLALIKLFAGDVNRSRQ 731
Query: 54 AFARHF 37
A H+
Sbjct: 732 LLASHW 737
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 23.0 bits (47), Expect = 8.5
Identities = 8/36 (22%), Positives = 20/36 (55%)
Frame = +3
Query: 336 FDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWE 443
+DG + L+ ++E + S + G+++ V+W+
Sbjct: 175 YDGFKVDLRHMDEKSGSNIVDVGVDLSEFYMSVEWD 210
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.0 bits (47), Expect = 8.5
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 372 ELTQSIYIPKGINVPSLAREVDWEFNPLNVKVGSHITGGDLYGIVQRTLWS-STGCWSRP 548
E YIPKG + ++ ++ W P K+GS G + + S T R
Sbjct: 697 EAKNDAYIPKGGDKKIISTKLQWNAKP---KIGSLDNASHKPGGGDKRIESIKTDFKERA 753
Query: 549 KPR--EQLPISHRPG 587
KP+ + I+++PG
Sbjct: 754 KPKIGSKDNITYKPG 768
>AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 23.0 bits (47), Expect = 8.5
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +3
Query: 564 LPISHRPGTTKSPTWCWRRSSTV 632
LP + R ++ PT CW + V
Sbjct: 132 LPSNQRSSSSSKPTPCWESNKDV 154
>AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 23.0 bits (47), Expect = 8.5
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +3
Query: 564 LPISHRPGTTKSPTWCWRRSSTV 632
LP + R ++ PT CW + V
Sbjct: 132 LPSNQRSSSSSKPTPCWESNKDV 154
>AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 23.0 bits (47), Expect = 8.5
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +3
Query: 564 LPISHRPGTTKSPTWCWRRSSTV 632
LP + R ++ PT CW + V
Sbjct: 132 LPSNQRSSSSSKPTPCWESNKDV 154
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,763
Number of Sequences: 2352
Number of extensions: 16124
Number of successful extensions: 51
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -