Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1136
         (667 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0921 + 21586034-21586229,21586464-21586576,21586768-215868...    28   7.7  
04_03_0558 + 17111138-17111996,17112474-17112564,17112647-171132...    28   7.7  

>10_08_0921 +
           21586034-21586229,21586464-21586576,21586768-21586875,
           21586967-21587205,21587301-21587399,21587448-21587535,
           21587617-21587750,21588274-21588362,21588718-21588751,
           21588830-21588898,21589216-21589339
          Length = 430

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = -2

Query: 585 ELIHPSKC*KKRTYFKVFNVFEVDLGSAAHLLKMV-IRKKNEFQLLL 448
           ++IHPSK    R+ + ++ +F +D G  A L ++V +R+K  F L++
Sbjct: 234 QVIHPSKFHHLRSIYSLYYLFSMD-GDFAPLPELVKLRRKYGFLLVI 279


>04_03_0558 +
           17111138-17111996,17112474-17112564,17112647-17113268,
           17113378-17113457,17113871-17113937,17114138-17114263,
           17114333-17114415,17115334-17115777,17115834-17115927,
           17116038-17116124,17116474-17116594,17116671-17116709,
           17116828-17116997
          Length = 960

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = -1

Query: 535 IQRIRSRLRFSGS---PAENGNQKKKRVSTVTYLFIYLFSFYKNQTKKMCSTLYTNA 374
           IQ++  ++RF  S   P+E+ + +KK +ST   +F  + S  KN T    S LY  A
Sbjct: 424 IQKVL-KVRFKDSTPPPSESSSSRKKSISTAETIFKDIKSIKKNDTSHWHS-LYDEA 478


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,474,368
Number of Sequences: 37544
Number of extensions: 292993
Number of successful extensions: 562
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)