BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1136
(667 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein. 26 1.2
AJ302655-1|CAC35520.1| 332|Anopheles gambiae gSG5 protein protein. 25 2.1
>AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein.
Length = 461
Score = 25.8 bits (54), Expect = 1.2
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 306 FNKIPLY--WSKINMFFFFHLCFIKALVYNVLHIFFV 410
FN IPL +++ FF+ +CF++ + + L+ FV
Sbjct: 369 FNYIPLQEGTTRLRYTFFYAVCFVETVAASALYGTFV 405
>AJ302655-1|CAC35520.1| 332|Anopheles gambiae gSG5 protein protein.
Length = 332
Score = 25.0 bits (52), Expect = 2.1
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 307 NFP*KLRFLFISITRRREIYHFCINKRKAIRGPASQKSYYFNVCEARTSCLKKR 146
+F ++ FL TRR + + C+ KR+ + K V E SC KK+
Sbjct: 276 SFADRMTFLSSKFTRRVDKFEKCVVKRRQL-----MKQNEREVVEKSKSCFKKQ 324
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,878
Number of Sequences: 2352
Number of extensions: 11999
Number of successful extensions: 66
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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