Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1135
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    24   1.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.3  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.3  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 539 RSQHQKGTHDLSN 501
           R+QH+KG HD  N
Sbjct: 97  RAQHEKGMHDQQN 109


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = -3

Query: 117 FICNENKVIFLFFLYLFVTNKRGLCDLCDFF*QVSG 10
           F+C      F +  Y++ T  R L  +  +  Q++G
Sbjct: 79  FLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAG 114


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = -3

Query: 117 FICNENKVIFLFFLYLFVTNKRGLCDLCDFF*QVSG 10
           F+C      F +  Y++ T  R L  +  +  Q++G
Sbjct: 35  FLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAG 70


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 104 RIK*FFYFFCIYL*QTSVVCVIYATFF 24
           RI  FF  F +YL    +VC+    F+
Sbjct: 127 RIMMFFRMFGLYLSSFILVCISVDRFY 153


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 104 RIK*FFYFFCIYL*QTSVVCVIYATFF 24
           RI  FF  F +YL    +VC+    F+
Sbjct: 127 RIMMFFRMFGLYLSSFILVCISVDRFY 153


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 341 FNSSLYLSTDYDIDIESVS 285
           F  S+YL+T  D D ES+S
Sbjct: 49  FIVSVYLTTKIDNDGESIS 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,556
Number of Sequences: 336
Number of extensions: 2395
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)