Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1134
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.58 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   3.1  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.5  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 75  KLVKTFYFWYDLR 113
           KL+K FYFW+ L+
Sbjct: 132 KLMKNFYFWFVLK 144


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = -3

Query: 328 ILCIILVNEFRVEWHVFFFSHNGIVGCRSYFF 233
           ++C+++ +E  V  H+ + S  GI+     F+
Sbjct: 261 VICVLVQSEKIVWLHLVYISFLGIICAADVFY 292


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 288 GMCFSSAIMASWGAGHTSSASPRQH 214
           G+C  S ++ ++GAG  S+     H
Sbjct: 407 GLCKESGVVKAYGAGLLSAYGELLH 431


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 54  ILTFECGKLVKTFY 95
           IL F  GK++K+F+
Sbjct: 80  ILVFSKGKVIKSFF 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,938
Number of Sequences: 336
Number of extensions: 3155
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)