Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1134
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81107-6|CAB03230.1| 342|Caenorhabditis elegans Hypothetical pr... 96 1e-20
Z81553-6|CAB04495.1| 388|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z81112-1|CAB03272.2| 673|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF067942-4|AAG45573.2| 324|Caenorhabditis elegans Hypothetical ... 28 5.2
Z70270-5|CAE17743.1| 181|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z48717-3|CAA88606.1| 520|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z48717-1|CAA88603.1| 520|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 27 9.1
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 27 9.1
>Z81107-6|CAB03230.1| 342|Caenorhabditis elegans Hypothetical
protein R07H5.8 protein.
Length = 342
Score = 96.3 bits (229), Expect = 1e-20
Identities = 45/97 (46%), Positives = 62/97 (63%)
Frame = +2
Query: 254 HDAIMAEEKHMPLYSELVDKYNAEYIAGGSVQNSLRVAQWILKKPNICTYFGCVGNDEYA 433
+DAI+ ++KH +++EL + EYI GG+ QNSLRVAQWIL PN +FG VG D+Y
Sbjct: 36 NDAILCDDKHNDMFTELTRDFKVEYIPGGAAQNSLRVAQWILNAPNRTVFFGAVGKDQYG 95
Query: 434 KLLKERAIADGVHVQYQVSNEVATGHVQC**LVHTAH 544
LL +A GV+V YQ++ V TG C L++ H
Sbjct: 96 DLLASKAKEAGVNVHYQINETVKTG--TCAALINGTH 130
Score = 32.7 bits (71), Expect = 0.18
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 508 SCAVLVTGTHRSLCANL 558
+CA L+ GTHRSLCA+L
Sbjct: 121 TCAALINGTHRSLCAHL 137
Score = 30.3 bits (65), Expect = 0.98
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 165 EGLLVGIGNPLLDISASVDEDLLKKYDL 248
E L+G+ NPLLDI +V++ L K+ L
Sbjct: 6 ENTLIGMCNPLLDIQTTVEKAFLDKWGL 33
>Z81553-6|CAB04495.1| 388|Caenorhabditis elegans Hypothetical
protein F56H6.6 protein.
Length = 388
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -2
Query: 383 SLESIVLLLMNSERFHQQYTLHYTCQRVPSRVACVFLQP 267
+LE + +L + F ++ T+HY + PS++ C + P
Sbjct: 104 ALEYVAMLHQCDKEFGEKVTVHYVFRTSPSQMDCPVITP 142
>Z81112-1|CAB03272.2| 673|Caenorhabditis elegans Hypothetical
protein T02B5.1 protein.
Length = 673
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -3
Query: 277 FFSHNGIVGCRSYFFSKS-SSTLADMSNKGFPMPTNNPSWSHMESE 143
F +H GI + Y K S AD N P+P+ + W+ E
Sbjct: 456 FGTHRGIFAPKDYIIEKIYSGMFADFVNFENPLPSGDQKWNQYTKE 501
>AF067942-4|AAG45573.2| 324|Caenorhabditis elegans Hypothetical
protein ZK6.6 protein.
Length = 324
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 96 FWYDLRPHNLYYIMDVSDSICDQE--GLLVGIGNPLLDISASVDEDLLKKYDLHPTM 260
FW + P +L + M S I G VG+G ++ I S +K + L PTM
Sbjct: 115 FWVSIYPTSLTFNMHNSKMIYLPAIYGFGVGVGETIMGIIISTLSKRIKDFGLKPTM 171
>Z70270-5|CAE17743.1| 181|Caenorhabditis elegans Hypothetical
protein C53D6.8 protein.
Length = 181
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -3
Query: 277 FFSHNGIVGCRSYFFSKSSSTLADMSNKGFPMPTNNPSWSHMESETS 137
F+ GCR + S L ++N G P+ N P W + E S
Sbjct: 28 FYEDVKTYGCRCLQKDQRSQLLNSLTN-GIPLNANRPIWKPLSREPS 73
>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 27.1 bits (57), Expect = 9.1
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = -1
Query: 270 AIMASWGAGHTSSASPR--QHWRIC--PTKDSLCPLIILLGHI----WNQKRPLCNTSYV 115
A++ + +G T + R QH I P+ D L + + H+ W R C + +
Sbjct: 1165 AVLDAVNSGSTEVPASRLHQHLHILSQPSADQLSGIDMEFRHLTTLKWTSNR--CTVANL 1222
Query: 114 VVNRTKNKMFSRV 76
VNR KN+M S V
Sbjct: 1223 PVNRPKNRMLSAV 1235
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 27.1 bits (57), Expect = 9.1
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = -1
Query: 270 AIMASWGAGHTSSASPR--QHWRIC--PTKDSLCPLIILLGHI----WNQKRPLCNTSYV 115
A++ + +G T + R QH I P+ D L + + H+ W R C + +
Sbjct: 1878 AVLDAVNSGSTEVPASRLHQHLHILSQPSADQLSGIDMEFRHLTTLKWTSNR--CTVANL 1935
Query: 114 VVNRTKNKMFSRV 76
VNR KN+M S V
Sbjct: 1936 PVNRPKNRMLSAV 1948
>Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical protein
C09D8.1c protein.
Length = 1216
Score = 27.1 bits (57), Expect = 9.1
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = -1
Query: 270 AIMASWGAGHTSSASPR--QHWRIC--PTKDSLCPLIILLGHI----WNQKRPLCNTSYV 115
A++ + +G T + R QH I P+ D L + + H+ W R C + +
Sbjct: 914 AVLDAVNSGSTEVPASRLHQHLHILSQPSADQLSGIDMEFRHLTTLKWTSNR--CTVANL 971
Query: 114 VVNRTKNKMFSRV 76
VNR KN+M S V
Sbjct: 972 PVNRPKNRMLSAV 984
>Z48717-3|CAA88606.1| 520|Caenorhabditis elegans Hypothetical
protein T10B9.5 protein.
Length = 520
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 201 PTKDSLCPLIILLGHIWNQKRPLCNTSYVVVNRTKNKMFSRV 76
P KD L+ GH W + R L + ++ N++ K+FS V
Sbjct: 109 PDKDPRIHLVTSQGHRWKRLRTLASPTF--SNKSLRKIFSTV 148
>Z48717-1|CAA88603.1| 520|Caenorhabditis elegans Hypothetical
protein T10B9.1 protein.
Length = 520
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -1
Query: 201 PTKDSLCPLIILLGHIWNQKRPLCNTSYVVVNRTKNKMFSRVYRTRMSR*NHV 43
P K+ L++ GH W + R L + ++ N++ K+ S V T + H+
Sbjct: 109 PNKNKRAHLVLAQGHRWKRLRTLASPTF--SNKSLRKIMSTVEETVVELMRHL 159
>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 27.1 bits (57), Expect = 9.1
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = -1
Query: 270 AIMASWGAGHTSSASPR--QHWRIC--PTKDSLCPLIILLGHI----WNQKRPLCNTSYV 115
A++ + +G T + R QH I P+ D L + + H+ W R C + +
Sbjct: 1165 AVLDAVNSGSTEVPASRLHQHLHILSQPSADQLSGIDMEFRHLTTLKWTSNR--CTVANL 1222
Query: 114 VVNRTKNKMFSRV 76
VNR KN+M S V
Sbjct: 1223 PVNRPKNRMLSAV 1235
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 27.1 bits (57), Expect = 9.1
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = -1
Query: 270 AIMASWGAGHTSSASPR--QHWRIC--PTKDSLCPLIILLGHI----WNQKRPLCNTSYV 115
A++ + +G T + R QH I P+ D L + + H+ W R C + +
Sbjct: 1878 AVLDAVNSGSTEVPASRLHQHLHILSQPSADQLSGIDMEFRHLTTLKWTSNR--CTVANL 1935
Query: 114 VVNRTKNKMFSRV 76
VNR KN+M S V
Sbjct: 1936 PVNRPKNRMLSAV 1948
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 27.1 bits (57), Expect = 9.1
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = -1
Query: 270 AIMASWGAGHTSSASPR--QHWRIC--PTKDSLCPLIILLGHI----WNQKRPLCNTSYV 115
A++ + +G T + R QH I P+ D L + + H+ W R C + +
Sbjct: 1185 AVLDAVNSGSTEVPASRLHQHLHILSQPSADQLSGIDMEFRHLTTLKWTSNR--CTVANL 1242
Query: 114 VVNRTKNKMFSRV 76
VNR KN+M S V
Sbjct: 1243 PVNRPKNRMLSAV 1255
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 27.1 bits (57), Expect = 9.1
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = -1
Query: 270 AIMASWGAGHTSSASPR--QHWRIC--PTKDSLCPLIILLGHI----WNQKRPLCNTSYV 115
A++ + +G T + R QH I P+ D L + + H+ W R C + +
Sbjct: 1898 AVLDAVNSGSTEVPASRLHQHLHILSQPSADQLSGIDMEFRHLTTLKWTSNR--CTVANL 1955
Query: 114 VVNRTKNKMFSRV 76
VNR KN+M S V
Sbjct: 1956 PVNRPKNRMLSAV 1968
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,440,337
Number of Sequences: 27780
Number of extensions: 287139
Number of successful extensions: 758
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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