Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1133
(636 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020238-1|AAH20238.1| 596|Homo sapiens SRP68 protein protein. 81 3e-15
AK074698-1|BAC11145.1| 627|Homo sapiens protein ( Homo sapiens ... 81 3e-15
AF195951-1|AAF24308.1| 619|Homo sapiens signal recognition part... 81 3e-15
DQ368336-1|ABD15137.1| 331|Homo sapiens MAP/microtubule affinit... 31 2.6
AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens ... 31 2.6
DQ338460-1|ABC69298.1| 494|Homo sapiens putative RhoGAP protein... 31 4.5
BC114490-1|AAI14491.1| 494|Homo sapiens Rho GTPase activating p... 31 4.5
BC113888-1|AAI13889.1| 465|Homo sapiens ARHGAP19 protein protein. 31 4.5
AY336750-1|AAR02412.1| 517|Homo sapiens putative RhoGAP protein... 31 4.5
AL359385-3|CAI13731.2| 494|Homo sapiens Rho GTPase activating p... 31 4.5
AL359385-1|CAI13728.1| 485|Homo sapiens Rho GTPase activating p... 31 4.5
AK093316-1|BAC04130.1| 313|Homo sapiens protein ( Homo sapiens ... 31 4.5
AK074122-1|BAB84948.1| 196|Homo sapiens FLJ00194 protein protein. 31 4.5
X63337-1|CAA44937.1| 177|Homo sapiens high sulfur keratin protein. 30 7.9
BC105071-1|AAI05072.1| 177|Homo sapiens keratin associated prot... 30 7.9
BC105069-1|AAI05070.1| 177|Homo sapiens keratin associated prot... 30 7.9
AY779755-1|AAV31776.1| 159|Homo sapiens truncated nuclear facto... 30 7.9
AJ406926-1|CAC27565.1| 177|Homo sapiens keratin associated prot... 30 7.9
AB052934-1|BAB61026.1| 177|Homo sapiens keratin associated prot... 30 7.9
>BC020238-1|AAH20238.1| 596|Homo sapiens SRP68 protein protein.
Length = 596
Score = 81.0 bits (191), Expect = 3e-15
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = +2
Query: 230 KKTAKSTQIPQGDRRHYRRRDVTTTHLTANNAENRLLYIPLLQAERAWAHAMQLRQEANT 409
++ K+ G+R + + VT LT +NR L + L+ AERAW++AMQL+QEANT
Sbjct: 92 RRLRKTLNFKMGNRHKFTGKKVTEELLT----DNRYLLLVLMDAERAWSYAMQLKQEANT 147
Query: 410 EPRKKFHLVSRLKKACAHGQMLLQL 484
EPRK+FHL+SRL+KA H + L +L
Sbjct: 148 EPRKRFHLLSRLRKAVKHAEELERL 172
Score = 43.6 bits (98), Expect = 6e-04
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +3
Query: 48 GQESEIENGKVTAVENSDKKNEKAPILLNLEIFRITRDSQQQHGLRHADYQ 200
G E EN + +A K N++ L+LEI +I ++SQQQHGLRH D+Q
Sbjct: 34 GGEENKENERPSA---GSKANKEFGDSLSLEILQIIKESQQQHGLRHGDFQ 81
Score = 39.5 bits (88), Expect = 0.010
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +1
Query: 466 ADAFAAL*GKRQVRTRTVLEAGAYASWLRGVLLLELQQWREAADSLQRARIVLEQL 633
A+ L +V +T LEA AY ++L G+L E Q+W+ A ++ + + + E+L
Sbjct: 166 AEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEHQEWKAAIEAFNKCKTIYEKL 221
>AK074698-1|BAC11145.1| 627|Homo sapiens protein ( Homo sapiens
cDNA FLJ90217 fis, clone MAMMA1002234, highly similar to
SIGNAL RECOGNITION PARTICLE 68 KD PROTEIN. ).
Length = 627
Score = 81.0 bits (191), Expect = 3e-15
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = +2
Query: 230 KKTAKSTQIPQGDRRHYRRRDVTTTHLTANNAENRLLYIPLLQAERAWAHAMQLRQEANT 409
++ K+ G+R + + VT LT +NR L + L+ AERAW++AMQL+QEANT
Sbjct: 92 RRLRKTLNFKMGNRHKFTGKKVTEELLT----DNRYLLLVLMDAERAWSYAMQLKQEANT 147
Query: 410 EPRKKFHLVSRLKKACAHGQMLLQL 484
EPRK+FHL+SRL+KA H + L +L
Sbjct: 148 EPRKRFHLLSRLRKAVKHAEELERL 172
Score = 43.6 bits (98), Expect = 6e-04
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +3
Query: 48 GQESEIENGKVTAVENSDKKNEKAPILLNLEIFRITRDSQQQHGLRHADYQ 200
G E EN + +A K N++ L+LEI +I ++SQQQHGLRH D+Q
Sbjct: 34 GGEENKENERPSA---GSKANKEFGDSLSLEILQIIKESQQQHGLRHGDFQ 81
Score = 39.5 bits (88), Expect = 0.010
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +1
Query: 466 ADAFAAL*GKRQVRTRTVLEAGAYASWLRGVLLLELQQWREAADSLQRARIVLEQL 633
A+ L +V +T LEA AY ++L G+L E Q+W+ A ++ + + + E+L
Sbjct: 166 AEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEHQEWKAAIEAFNKCKTIYEKL 221
>AF195951-1|AAF24308.1| 619|Homo sapiens signal recognition
particle 68 protein.
Length = 619
Score = 81.0 bits (191), Expect = 3e-15
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = +2
Query: 230 KKTAKSTQIPQGDRRHYRRRDVTTTHLTANNAENRLLYIPLLQAERAWAHAMQLRQEANT 409
++ K+ G+R + + VT LT +NR L + L+ AERAW++AMQL+QEANT
Sbjct: 84 RRLRKTLNFKMGNRHKFTGKKVTEELLT----DNRYLLLVLMDAERAWSYAMQLKQEANT 139
Query: 410 EPRKKFHLVSRLKKACAHGQMLLQL 484
EPRK+FHL+SRL+KA H + L +L
Sbjct: 140 EPRKRFHLLSRLRKAVKHAEELERL 164
Score = 43.6 bits (98), Expect = 6e-04
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +3
Query: 48 GQESEIENGKVTAVENSDKKNEKAPILLNLEIFRITRDSQQQHGLRHADYQ 200
G E EN + +A K N++ L+LEI +I ++SQQQHGLRH D+Q
Sbjct: 26 GGEENKENERPSA---GSKANKEFGDSLSLEILQIIKESQQQHGLRHGDFQ 73
Score = 39.5 bits (88), Expect = 0.010
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +1
Query: 466 ADAFAAL*GKRQVRTRTVLEAGAYASWLRGVLLLELQQWREAADSLQRARIVLEQL 633
A+ L +V +T LEA AY ++L G+L E Q+W+ A ++ + + + E+L
Sbjct: 158 AEELERLCKSNRVDAKTKLEAQAYTAYLSGMLRFEHQEWKAAIEAFNKCKTIYEKL 213
>DQ368336-1|ABD15137.1| 331|Homo sapiens MAP/microtubule
affinity-regulating kinase 3 protein.
Length = 331
Score = 31.5 bits (68), Expect = 2.6
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = -2
Query: 605 CNE-SAASRHCC--NSSSNTPRSQEAYAPASSTVRVRTCRFPH-KAAKASAHVH---MLS 447
C+E + A RH N N+ AYA + ++V TCR H K+ SA H ML
Sbjct: 45 CSERTTADRHSVIQNGKENSLTEMFAYAASPASVCTSTCRLRHQKSMSMSASGHPKMMLP 104
Query: 446 SVETQDETFFSVQC*LPD 393
++++ + F ++ +PD
Sbjct: 105 PIDSEGDNFKAIT--IPD 120
>AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens
cDNA FLJ43779 fis, clone TESTI2051488. ).
Length = 168
Score = 31.5 bits (68), Expect = 2.6
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -2
Query: 608 RCNESAASRHCCNS--SSNTPR-SQEAYAPASSTVRVRTCRFPHKAAKASAH 462
RC S+ SR CC+S SS R S + +P ST R +C H + S H
Sbjct: 86 RCGGSSRSRECCSSLHSSRGSRGSSWSSSPPGSTCRWCSCHSHHHSHHRSHH 137
>DQ338460-1|ABC69298.1| 494|Homo sapiens putative RhoGAP protein
protein.
Length = 494
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 445 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 305
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 385 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 431
>BC114490-1|AAI14491.1| 494|Homo sapiens Rho GTPase activating
protein 19 protein.
Length = 494
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 445 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 305
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 385 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 431
>BC113888-1|AAI13889.1| 465|Homo sapiens ARHGAP19 protein protein.
Length = 465
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 445 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 305
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 356 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 402
>AY336750-1|AAR02412.1| 517|Homo sapiens putative RhoGAP protein
protein.
Length = 517
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 445 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 305
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 385 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 431
>AL359385-3|CAI13731.2| 494|Homo sapiens Rho GTPase activating
protein 19 protein.
Length = 494
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 445 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 305
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 385 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 431
>AL359385-1|CAI13728.1| 485|Homo sapiens Rho GTPase activating
protein 19 protein.
Length = 485
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 445 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 305
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 376 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 422
>AK093316-1|BAC04130.1| 313|Homo sapiens protein ( Homo sapiens
cDNA FLJ35997 fis, clone TESTI2015042, weakly similar to
RHO-GTPASE-ACTIVATING PROTEIN 1. ).
Length = 313
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 445 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 305
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 204 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 250
>AK074122-1|BAB84948.1| 196|Homo sapiens FLJ00194 protein protein.
Length = 196
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 445 QSRHKMKLFSRFSVSFLTQLHGMSPCPLGLQQRYVQQSILGIVGRKV 305
+S K +L +F+ LTQ G P +Q+R +S G++ RKV
Sbjct: 87 ESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKV 133
>X63337-1|CAA44937.1| 177|Homo sapiens high sulfur keratin protein.
Length = 177
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -2
Query: 632 SCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRVRTCRFP 489
SCS++ C S CC +SS PR E S + C FP
Sbjct: 13 SCSTS--GTCGSSCCQPSCCETSSCQPRCCETSCCQPSCCQTSFCGFP 58
>BC105071-1|AAI05072.1| 177|Homo sapiens keratin associated protein
1-1 protein.
Length = 177
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -2
Query: 632 SCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRVRTCRFP 489
SCS++ C S CC +SS PR E S + C FP
Sbjct: 13 SCSTS--GTCGSSCCQPSCCETSSCQPRCCETSCCQPSCCQTSFCGFP 58
>BC105069-1|AAI05070.1| 177|Homo sapiens keratin associated protein
1-1 protein.
Length = 177
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -2
Query: 632 SCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRVRTCRFP 489
SCS++ C S CC +SS PR E S + C FP
Sbjct: 13 SCSTS--GTCGSSCCQPSCCETSSCQPRCCETSCCQPSCCQTSFCGFP 58
>AY779755-1|AAV31776.1| 159|Homo sapiens truncated nuclear factor
of kappa light polypeptide gene enhancer in B-cells in
protein.
Length = 159
Score = 29.9 bits (64), Expect = 7.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 563 CWSCNNGARQRTHCNGPGSYSN 628
CWS GAR+RT G ++SN
Sbjct: 52 CWSGGGGARRRTRLGGSAAHSN 73
>AJ406926-1|CAC27565.1| 177|Homo sapiens keratin associated protein
1.1 protein.
Length = 177
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -2
Query: 632 SCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRVRTCRFP 489
SCS++ C S CC +SS PR E S + C FP
Sbjct: 13 SCSTS--GTCGSSCCQPSCCETSSCQPRCCETSCCQPSCCQTSFCGFP 58
>AB052934-1|BAB61026.1| 177|Homo sapiens keratin associated protein
1.1A protein.
Length = 177
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -2
Query: 632 SCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRVRTCRFP 489
SCS++ C S CC +SS PR E S + C FP
Sbjct: 13 SCSTS--GTCGSSCCQPSCCETSSCQPRCCETSCCQPSCCQTSFCGFP 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,030,264
Number of Sequences: 237096
Number of extensions: 1879153
Number of successful extensions: 9141
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9105
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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