Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1132
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           29   0.032
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    24   0.92 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   1.2  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    24   1.2  
AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.       23   2.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   3.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.9  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   6.5  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 29.1 bits (62), Expect = 0.032
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 388 SPPQQQPSTFYVPSPTAVRQNTSPSPSRQSATVRRRCSS 504
           SP Q Q     +P+PT    ++SP+PS  S +     SS
Sbjct: 180 SPDQYQSYQILLPTPTCSEASSSPTPSHSSESSFSAASS 218


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = +1

Query: 424 PSPTAVRQNTSPSPSRQSATVR---RRCSSPMYIDQKEH 531
           P+P ++  NTS S S  S +V        SP YI  + H
Sbjct: 156 PTPVSINNNTSTSSSASSPSVTAAPHLRDSPNYIKPQLH 194



 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = +1

Query: 370 SAHDVLSPPQQQPSTFYVPSPTAVRQNTSPSPSRQSATVRRRCSSPMY 513
           S+  V + P  + S  Y+     V   ++ SP+  SAT     +S ++
Sbjct: 172 SSPSVTAAPHLRDSPNYIKPQLHVSTGSTSSPTIASATYTNSANSSIW 219


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 635 TPISSLGTTFPPVTHIAVVYYIVTFIILI 549
           TP  SLG T  PV+    +Y IV   I+I
Sbjct: 9   TPPHSLGNTVTPVSLRFKLYTIVHIFIII 37


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +1

Query: 394 PQQQPSTFYVPSPTAVRQNTSPSPSRQSATVRRRCSSP 507
           PQ+  ST    S  +  Q+  P   R  + V RRC  P
Sbjct: 203 PQRTASTASSASNYSPSQSPEPESVRPLSLVVRRCEEP 240


>AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.
          Length = 38

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 204 EGEQRTGLGSRLPE 163
           E  QRTGLG RL E
Sbjct: 2   ESRQRTGLGKRLFE 15


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 5/21 (23%), Positives = 14/21 (66%)
 Frame = -2

Query: 487 LLWPIVWTAKVTCFVAQLWGW 425
           LL+ +++   + C++ ++ GW
Sbjct: 123 LLFLVIFVLNIWCWIVEIGGW 143


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 393 TSAATIHILCSQP 431
           TS AT ++LCS+P
Sbjct: 63  TSLATCNMLCSEP 75


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 13/53 (24%), Positives = 24/53 (45%)
 Frame = +3

Query: 459 FAVQTIGHSKTTLQLSYVYRSKGASKDPLINQDDESHDVVDYSYMSDRRKSSS 617
           FAV  +     TL +++ Y      +   ++ DD+  D +  S   + R +SS
Sbjct: 258 FAVPGLSPLGHTLSMNHKYEKIDKEEHESMDDDDDDDDDMSNSENQNPRFTSS 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,222
Number of Sequences: 336
Number of extensions: 2609
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)