BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1132 (635 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY095039-1|AAM11367.1| 1710|Drosophila melanogaster LD28380p pro... 31 1.3 AE014134-2294|AAF53256.2| 1710|Drosophila melanogaster CG16972-P... 31 1.3 AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p pro... 31 1.7 AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA... 31 1.7 AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB... 31 1.7 AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 30 3.0 AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB... 29 4.0 AY229969-1|AAP04480.1| 1102|Drosophila melanogaster bitesize iso... 28 9.2 AY048676-1|AAL06602.1| 797|Drosophila melanogaster myosin phosp... 28 9.2 AE014297-1903|AAX52953.1| 1102|Drosophila melanogaster CG33555-P... 28 9.2 AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-P... 28 9.2 AE014296-1104|AAF50670.1| 1320|Drosophila melanogaster CG10226-P... 28 9.2 >AY095039-1|AAM11367.1| 1710|Drosophila melanogaster LD28380p protein. Length = 1710 Score = 31.1 bits (67), Expect = 1.3 Identities = 15/33 (45%), Positives = 15/33 (45%) Frame = +1 Query: 382 VLSPPQQQPSTFYVPSPTAVRQNTSPSPSRQSA 480 V P QP Y PSPT NT P RQ A Sbjct: 1250 VAQSPYAQPVLIYPPSPTTPPPNTEPHRPRQQA 1282 >AE014134-2294|AAF53256.2| 1710|Drosophila melanogaster CG16972-PA protein. Length = 1710 Score = 31.1 bits (67), Expect = 1.3 Identities = 15/33 (45%), Positives = 15/33 (45%) Frame = +1 Query: 382 VLSPPQQQPSTFYVPSPTAVRQNTSPSPSRQSA 480 V P QP Y PSPT NT P RQ A Sbjct: 1250 VAQSPYAQPVLIYPPSPTTPPPNTEPHRPRQQA 1282 >AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p protein. Length = 846 Score = 30.7 bits (66), Expect = 1.7 Identities = 42/145 (28%), Positives = 56/145 (38%), Gaps = 2/145 (1%) Frame = +3 Query: 204 RLQDSQTNVHRHPHQSFLSSSWKSLYNSLFKSDKWSSRLTKSIGQIRGRSKKTCSISSRR 383 R +D + H S SS S +S K SS+ KS RS + S S R Sbjct: 356 RDRDRSRDKSHSKHSSSSSSKHSSSNSSSSKHKSSSSKNDKSSSSSSSRSNRESSSSKRS 415 Query: 384 LISTSAATIHILCSQPHSCATKHVTFAVQTIGHSKTTLQLSYVYRSKGASKDPLINQDDE 563 T++++ H S H KH K++ S R KG KD +D + Sbjct: 416 --GTTSSSRHE--SSSHK---KH-----------KSSSSSSRSERDKGKEKDKEREKDSQ 457 Query: 564 S--HDVVDYSYMSDRRKSSSEGRNR 632 S H S S RRK GR+R Sbjct: 458 SRSHHSSSSSSSSSRRKDHDRGRDR 482 >AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA, isoform A protein. Length = 1109 Score = 30.7 bits (66), Expect = 1.7 Identities = 42/145 (28%), Positives = 56/145 (38%), Gaps = 2/145 (1%) Frame = +3 Query: 204 RLQDSQTNVHRHPHQSFLSSSWKSLYNSLFKSDKWSSRLTKSIGQIRGRSKKTCSISSRR 383 R +D + H S SS S +S K SS+ KS RS + S S R Sbjct: 619 RDRDRSRDKSHSKHSSSSSSKHSSSNSSSSKHKSSSSKNDKSSSSSSSRSNRESSSSKRS 678 Query: 384 LISTSAATIHILCSQPHSCATKHVTFAVQTIGHSKTTLQLSYVYRSKGASKDPLINQDDE 563 T++++ H S H KH K++ S R KG KD +D + Sbjct: 679 --GTTSSSRHE--SSSHK---KH-----------KSSSSSSRSERDKGKEKDKEREKDSQ 720 Query: 564 S--HDVVDYSYMSDRRKSSSEGRNR 632 S H S S RRK GR+R Sbjct: 721 SRSHHSSSSSSSSSRRKDHDRGRDR 745 >AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB, isoform B protein. Length = 1150 Score = 30.7 bits (66), Expect = 1.7 Identities = 42/145 (28%), Positives = 56/145 (38%), Gaps = 2/145 (1%) Frame = +3 Query: 204 RLQDSQTNVHRHPHQSFLSSSWKSLYNSLFKSDKWSSRLTKSIGQIRGRSKKTCSISSRR 383 R +D + H S SS S +S K SS+ KS RS + S S R Sbjct: 619 RDRDRSRDKSHSKHSSSSSSKHSSSNSSSSKHKSSSSKNDKSSSSSSSRSNRESSSSKRS 678 Query: 384 LISTSAATIHILCSQPHSCATKHVTFAVQTIGHSKTTLQLSYVYRSKGASKDPLINQDDE 563 T++++ H S H KH K++ S R KG KD +D + Sbjct: 679 --GTTSSSRHE--SSSHK---KH-----------KSSSSSSRSERDKGKEKDKEREKDSQ 720 Query: 564 S--HDVVDYSYMSDRRKSSSEGRNR 632 S H S S RRK GR+R Sbjct: 721 SRSHHSSSSSSSSSRRKDHDRGRDR 745 >AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA protein. Length = 950 Score = 29.9 bits (64), Expect = 3.0 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +1 Query: 391 PPQQQPSTFYVPSPTAVRQNTSPSPSRQSATVRRRCSS 504 PP +PS+ Y P P+ Q+ P P + RR SS Sbjct: 190 PPASRPSSSYGPPPSRPSQSYGPPPQAKKPHHRRPSSS 227 >AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB, isoform B protein. Length = 1209 Score = 29.5 bits (63), Expect = 4.0 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = +3 Query: 228 VHRHPHQSFLSSSW--KSLYNSLFKSDKWSSRLTKSIGQIRGRSKKTCSISSRRLIST 395 +HR QS S W KSL +S+ + + S + IGQ R R K+T SS +ST Sbjct: 836 LHRKTSQS--SDPWQRKSL-SSILEGGRSSGDIIYDIGQRRERDKRTLGSSSSATVST 890 >AY229969-1|AAP04480.1| 1102|Drosophila melanogaster bitesize isoform 1 protein. Length = 1102 Score = 28.3 bits (60), Expect = 9.2 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 388 SPPQQQPSTFYVPSPTAVRQNTSPSPSRQSA 480 SPP++Q S + SP +RQ T P+P S+ Sbjct: 163 SPPKRQTSPQFRRSPEFMRQQTLPNPEAFSS 193 >AY048676-1|AAL06602.1| 797|Drosophila melanogaster myosin phosphatase DMBS-S protein. Length = 797 Score = 28.3 bits (60), Expect = 9.2 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +1 Query: 397 QQQPS-TFYVPSPTAVRQNTSPSPSRQSATVRRRCSSPMYIDQKE-HRKIHS 546 Q++P+ T P+ TA SPS + Q+ +RR P+ ++ E RK H+ Sbjct: 404 QKKPTVTIATPTSTAATAINSPSTTVQTPPIRRSFVPPVRDEESETQRKAHA 455 >AE014297-1903|AAX52953.1| 1102|Drosophila melanogaster CG33555-PB, isoform B protein. Length = 1102 Score = 28.3 bits (60), Expect = 9.2 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 388 SPPQQQPSTFYVPSPTAVRQNTSPSPSRQSA 480 SPP++Q S + SP +RQ T P+P S+ Sbjct: 163 SPPKRQTSPQFRRSPEFMRQQTLPNPEAFSS 193 >AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-PA, isoform A protein. Length = 1357 Score = 28.3 bits (60), Expect = 9.2 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 388 SPPQQQPSTFYVPSPTAVRQNTSPSPSRQSA 480 SPP++Q S + SP +RQ T P+P S+ Sbjct: 415 SPPKRQTSPQFRRSPEFMRQQTLPNPEAFSS 445 >AE014296-1104|AAF50670.1| 1320|Drosophila melanogaster CG10226-PA protein. Length = 1320 Score = 28.3 bits (60), Expect = 9.2 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Frame = +3 Query: 162 ARATVNQVQCAALLRLQDS-----QTNVHRHPHQSFLSSSWKSLYNSLFKS 299 A T+ Q++ A LR ++ V R+ HQ W+ L NSL KS Sbjct: 929 ATETITQIRTVAGLRREEELIKIYDKEVERYRHQILSRLKWRGLVNSLGKS 979 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,681,823 Number of Sequences: 53049 Number of extensions: 521831 Number of successful extensions: 2314 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2049 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2311 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2662347150 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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