Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1132
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 31 0.69
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 31 0.69
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 31 0.69
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 31 0.91
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 30 1.6
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 30 1.6
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z77131-5|CAI79163.1| 112|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p... 29 3.7
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 28 4.9
U64860-1|AAB04991.1| 155|Caenorhabditis elegans Hypothetical pr... 28 4.9
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 28 6.4
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 27 8.5
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 27 8.5
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 31.1 bits (67), Expect = 0.69
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +1
Query: 391 PPQQQ----PSTFYVPSPTAVRQNTSPSPSRQSATVRRRCSSPMYIDQKEHR 534
PP+Q P +Y P+ A Q+ P P R R+R P Y E R
Sbjct: 197 PPRQTGGCLPGPYYSPNTMAPPQHQQPYPERNGGGCRQRSPQPQYPRTNEFR 248
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 31.1 bits (67), Expect = 0.69
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +1
Query: 391 PPQQQ----PSTFYVPSPTAVRQNTSPSPSRQSATVRRRCSSPMYIDQKEHR 534
PP+Q P +Y P+ A Q+ P P R R+R P Y E R
Sbjct: 197 PPRQTGGCLPGPYYSPNTMAPPQHQQPYPERNGGGCRQRSPQPQYPRTNEFR 248
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 31.1 bits (67), Expect = 0.69
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +1
Query: 391 PPQQQ----PSTFYVPSPTAVRQNTSPSPSRQSATVRRRCSSPMYIDQKEHR 534
PP+Q P +Y P+ A Q+ P P R R+R P Y E R
Sbjct: 197 PPRQTGGCLPGPYYSPNTMAPPQHQQPYPERNGGGCRQRSPQPQYPRTNEFR 248
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 31.1 bits (67), Expect = 0.69
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 388 SPPQQQPSTFYVPSPTAVRQNTSPSPSRQSATVRRRCSSP 507
S PQ+ +T P+ T T P+PSR SA R +P
Sbjct: 31 SVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAPTP 70
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 31.1 bits (67), Expect = 0.69
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 388 SPPQQQPSTFYVPSPTAVRQNTSPSPSRQSATVRRRCSSP 507
S PQ+ +T P+ T T P+PSR SA R +P
Sbjct: 160 SVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAPTP 199
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 30.7 bits (66), Expect = 0.91
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 549 NQDDESHDVVDYSYMSDRRKSSSEGRNRR 635
NQDD++HD+VD+ + + + E ++R+
Sbjct: 689 NQDDDTHDIVDWDKLDESDEDEDELKDRK 717
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +3
Query: 291 FKSDKWSSRLTKSIGQIRGRSKKTCSISSRRLISTSAATIHILCSQPHSCATKHVTFAVQ 470
+KSDK S S+ R ++ S +S LIS A + + ++ + +T H T+ +
Sbjct: 184 YKSDKSPSPFPVSVSTDSARGSRSESEASEPLISDDVAKMTV--NEMTNASTSHKTYKIY 241
Query: 471 TIGHSKT 491
+G + T
Sbjct: 242 VVGDTGT 248
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 385 LSPPQQQPSTFYVPSPTAVRQNTSPSPSRQSATVRRRCSSPM 510
L P +Q + VPSPT + T P P+ Q+ + R SP+
Sbjct: 1504 LKEPARQTTRSAVPSPTVPKIITVPEPAHQTDSQRVTAPSPV 1545
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 388 SPPQQQPSTFYVPSPTAVRQNTSPSPSRQSATVRRRCSS 504
SPP + + SP A R+ SPS S+ A RRR S
Sbjct: 420 SPPAPKRAKSRSKSPPAPRRRRSPSQSKSPAPRRRRSPS 458
>Z77131-5|CAI79163.1| 112|Caenorhabditis elegans Hypothetical
protein C54C6.7 protein.
Length = 112
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 409 STFYVPSPTAVRQNTSPSPSRQSATVRRRCSSPMYIDQKEHRKI 540
+T+YV +PT R ++ S + +S ++ R S M Q+E K+
Sbjct: 38 ATYYVQTPTVSRSSSPDSTASRSISISIRSSVSMTPSQEELEKM 81
>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +3
Query: 126 ANFDGAARDYDPARATVNQV--QCAALLRLQDSQTNVHRHPHQSFLSSSWKSLYNSLFKS 299
AN + ++ D P ++++ Q + D RHPH++ S+ ++ +FK+
Sbjct: 42 ANHEQSSFDPIPILKRISELLEQATDIFIKNDPDPLDDRHPHRTHPDSALGNILKIIFKN 101
Query: 300 DKWSSRLTKSIGQIRGRSKKTCSISSRRLI 389
D + ++L + I R +I RL+
Sbjct: 102 DDFMTKLV--VSYILARDNVELNIQGSRLL 129
>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +3
Query: 126 ANFDGAARDYDPARATVNQV--QCAALLRLQDSQTNVHRHPHQSFLSSSWKSLYNSLFKS 299
AN + ++ D P ++++ Q + D RHPH++ S+ ++ +FK+
Sbjct: 42 ANHEQSSFDPIPILKRISELLEQATDIFIKNDPDPLDDRHPHRTHPDSALGNILKIIFKN 101
Query: 300 DKWSSRLTKSIGQIRGRSKKTCSISSRRLI 389
D + ++L + I R +I RL+
Sbjct: 102 DDFMTKLV--VSYILARDNVELNIQGSRLL 129
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 385 LSPPQQQPSTFY-VPSPTAVRQNTSPSPSRQS 477
LSPP PS Y PS A ++SP+P R S
Sbjct: 241 LSPPYGVPSPSYSFPSSVASSASSSPAPQRSS 272
>U64860-1|AAB04991.1| 155|Caenorhabditis elegans Hypothetical
protein R106.1 protein.
Length = 155
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 433 WGWEHKMWMVAAEVEIRRRE 374
WG E K W V +E RRRE
Sbjct: 5 WGKEEKQWRVQRSMESRRRE 24
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 388 SPPQQQPSTFYVPSPTAVRQNTSPSPSRQSATVRRRCSSPMYIDQKEHRKIHS 546
SP + S Y P +++ QN + + R S +DQ+ + HS
Sbjct: 510 SPSHSKDSNSYTPPESSLSQNYNREDQHSNVLPERNFDSRQSVDQRREQPNHS 562
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Frame = +1
Query: 388 SPPQQQPSTFYVPSPTAVRQNTSPSPS-------RQSATVRRRCSSPMYIDQKEHR 534
SP Q++ S + VR+ SPSP +Q + +RRR SSPM + R
Sbjct: 438 SPEQKRNGRHDSRSVSPVRRRRSPSPDNRQLGSRKQYSPLRRRQSSPMVASPRRRR 493
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Frame = +1
Query: 388 SPPQQQPSTFYVPSPTAVRQNTSPSPS-------RQSATVRRRCSSPMYIDQKEHR 534
SP Q++ S + VR+ SPSP +Q + +RRR SSPM + R
Sbjct: 438 SPEQKRNGRHDSRSVSPVRRRRSPSPDNRQLGSRKQYSPLRRRQSSPMVASPRRRR 493
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,020,731
Number of Sequences: 27780
Number of extensions: 259335
Number of successful extensions: 1000
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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