Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1132
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    23   3.3  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   4.3  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   5.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   7.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   7.6  

>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 195 ALLRLQDSQTNVHRHPHQSFLSSSWKSLYNSL 290
           +L RL+    NVH  P +  + +  K +Y+SL
Sbjct: 14  SLTRLRRHIQNVHTRPSKEPICNICKRVYSSL 45


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 451 TSPSPSRQSATVRRRCSSPMYIDQKEHRK 537
           TSP  S +S  VR   +S   +    H+K
Sbjct: 330 TSPMTSTKSTIVRNHLNSTCSVTNSPHQK 358


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -2

Query: 451 CFVAQLWGWEHKMWMVAAEVEIR 383
           C+V Q+W   H  W  +    IR
Sbjct: 56  CWVTQIWTDHHLKWNASEFAGIR 78


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 54  HSIRFNKELLHTSCT 10
           +SI FN+  LHTS T
Sbjct: 548 NSINFNENKLHTSDT 562


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 54  HSIRFNKELLHTSCT 10
           +SI FN+  LHTS T
Sbjct: 548 NSINFNENKLHTSDT 562


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,656
Number of Sequences: 438
Number of extensions: 3127
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)