Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1130
(659 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY164485-1|AAO32798.1| 1732|Homo sapiens polycystic kidney disea... 34 0.39
AL031651-7|CAI19007.2| 1200|Homo sapiens novel protein protein. 31 2.8
AB051542-1|BAB21846.1| 1110|Homo sapiens KIAA1755 protein protein. 31 2.8
EF015904-1|ABM64215.1| 1281|Homo sapiens period 1 protein. 31 4.8
AF102137-1|AAF15544.1| 1290|Homo sapiens PER1 protein. 31 4.8
AF022991-1|AAC51765.1| 1290|Homo sapiens Rigui protein. 31 4.8
AB196633-1|BAE53435.1| 1857|Homo sapiens C8orfK23 protein protein. 31 4.8
AB088477-1|BAC06326.2| 1332|Homo sapiens KIAA0482 protein protein. 31 4.8
AB030817-1|BAA94085.1| 1290|Homo sapiens period1 protein. 31 4.8
AB002107-1|BAA22633.1| 1290|Homo sapiens hPer protein. 31 4.8
X78202-1|CAA55038.1| 469|Homo sapiens HBF-G2 (HFK-2) protein. 30 8.4
X74143-1|CAA52240.1| 469|Homo sapiens transcription factor prot... 30 8.4
BC068277-1|AAH68277.1| 607|Homo sapiens C2orf55 protein protein. 30 8.4
>AY164485-1|AAO32798.1| 1732|Homo sapiens polycystic kidney disease
1-like 3 protein.
Length = 1732
Score = 34.3 bits (75), Expect = 0.39
Identities = 23/67 (34%), Positives = 28/67 (41%)
Frame = -2
Query: 460 KGDRCGPLRYYASWRKGDVLQGD*VG*RQGFPSHDVVKRRPVNCNTTHYRANWVPGPPSR 281
KGD+C L+YY + GD L GD R G SH + + R PGP
Sbjct: 125 KGDKC-LLKYYFICQTGDFLDGDAHYERNGNNSHLYQRHKKTKRGVAIARDKMPPGPGHL 183
Query: 280 RTRCPDP 260
T C P
Sbjct: 184 PTTCHYP 190
>AL031651-7|CAI19007.2| 1200|Homo sapiens novel protein protein.
Length = 1200
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 289 PSRRTRCPDPPTGGRRHQRARQQNQCSASP 200
PSR T P+PPT G + R Q Q S +P
Sbjct: 457 PSRNTSSPEPPTPGLKFSFLRGQRQPSVTP 486
>AB051542-1|BAB21846.1| 1110|Homo sapiens KIAA1755 protein protein.
Length = 1110
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 289 PSRRTRCPDPPTGGRRHQRARQQNQCSASP 200
PSR T P+PPT G + R Q Q S +P
Sbjct: 367 PSRNTSSPEPPTPGLKFSFLRGQRQPSVTP 396
>EF015904-1|ABM64215.1| 1281|Homo sapiens period 1 protein.
Length = 1281
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 298 PGPPSRRTRCPDPPTGGRRHQRARQQNQCSAS 203
P PPSRR C R HQ R + C S
Sbjct: 817 PAPPSRRHHCRSKAKRSRHHQNPRAEAPCYVS 848
>AF102137-1|AAF15544.1| 1290|Homo sapiens PER1 protein.
Length = 1290
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 298 PGPPSRRTRCPDPPTGGRRHQRARQQNQCSAS 203
P PPSRR C R HQ R + C S
Sbjct: 826 PAPPSRRHHCRSKAKRSRHHQNPRAEAPCYVS 857
>AF022991-1|AAC51765.1| 1290|Homo sapiens Rigui protein.
Length = 1290
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 298 PGPPSRRTRCPDPPTGGRRHQRARQQNQCSAS 203
P PPSRR C R HQ R + C S
Sbjct: 826 PAPPSRRHHCRSKAKRSRHHQNPRAEAPCYVS 857
>AB196633-1|BAE53435.1| 1857|Homo sapiens C8orfK23 protein protein.
Length = 1857
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 323 RITIHWP-SFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPN 466
R+ WP S +TGK A +L+ + +P G K P P+A PN
Sbjct: 1749 RVRGWWPFSKSKELTGKVEAEFHLVTAEEAEKNPVGKARKEPEPLAKPN 1797
>AB088477-1|BAC06326.2| 1332|Homo sapiens KIAA0482 protein protein.
Length = 1332
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 298 PGPPSRRTRCPDPPTGGRRHQRARQQNQCSAS 203
P PPSRR C R HQ R + C S
Sbjct: 868 PAPPSRRHHCRSKAKRSRHHQNPRAEAPCYVS 899
>AB030817-1|BAA94085.1| 1290|Homo sapiens period1 protein.
Length = 1290
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 298 PGPPSRRTRCPDPPTGGRRHQRARQQNQCSAS 203
P PPSRR C R HQ R + C S
Sbjct: 826 PAPPSRRHHCRSKAKRSRHHQNPRAEAPCYVS 857
>AB002107-1|BAA22633.1| 1290|Homo sapiens hPer protein.
Length = 1290
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 298 PGPPSRRTRCPDPPTGGRRHQRARQQNQCSAS 203
P PPSRR C R HQ R + C S
Sbjct: 826 PAPPSRRHHCRSKAKRSRHHQNPRAEAPCYVS 857
>X78202-1|CAA55038.1| 469|Homo sapiens HBF-G2 (HFK-2) protein.
Length = 469
Score = 29.9 bits (64), Expect = 8.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 298 PGPPSRRTRCPDPPTGGRRHQRARQQNQCSASPVEQGISTSKYKL 164
P PP ++ + P PP G R +R R + C ++ G + +L
Sbjct: 65 PPPPPQQQQPPPPPRRGARRRRRRGPSSCCSAAHAHGAPEGQRQL 109
>X74143-1|CAA52240.1| 469|Homo sapiens transcription factor
protein.
Length = 469
Score = 29.9 bits (64), Expect = 8.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 298 PGPPSRRTRCPDPPTGGRRHQRARQQNQCSASPVEQGISTSKYKL 164
P PP ++ + P PP G R +R R + C ++ G + +L
Sbjct: 65 PPPPPQQQQPPPPPRRGARRRRRRGPSSCCSAAHAHGAPEGQRQL 109
>BC068277-1|AAH68277.1| 607|Homo sapiens C2orf55 protein protein.
Length = 607
Score = 29.9 bits (64), Expect = 8.4
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 298 PGPPSRRTRCPDPPTGGRRHQRAR-QQNQCSASPVEQG 188
PGPP+ P PP GG R +RAR Q + + VE+G
Sbjct: 287 PGPPA-----PLPPPGGARARRARLQHSSALTASVEEG 319
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,008,210
Number of Sequences: 237096
Number of extensions: 2350313
Number of successful extensions: 9805
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9768
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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