Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1129
         (498 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B624E Cluster: PREDICTED: similar to vacuolar s...    41   0.018
UniRef50_Q4RYP5 Cluster: Chromosome 16 SCAF14974, whole genome s...    37   0.29 
UniRef50_Q92673 Cluster: Sortilin-related receptor precursor; n=...    37   0.29 
UniRef50_A7RTI0 Cluster: Predicted protein; n=1; Nematostella ve...    36   0.51 
UniRef50_A5B414 Cluster: Putative uncharacterized protein; n=1; ...    32   6.2  

>UniRef50_UPI00015B624E Cluster: PREDICTED: similar to vacuolar
            sorting protein (vps); n=1; Nasonia vitripennis|Rep:
            PREDICTED: similar to vacuolar sorting protein (vps) -
            Nasonia vitripennis
          Length = 4076

 Score = 40.7 bits (91), Expect = 0.018
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 6/39 (15%)
 Frame = -2

Query: 473  YDSRRGHATITDQ------DDDDVPPIQGFSDDEPLVIA 375
            YD+RRG AT          +++D P I+GFSDDEPLVIA
Sbjct: 2159 YDTRRGQATFPGTVDAGLAEEEDSPVIRGFSDDEPLVIA 2197


>UniRef50_Q4RYP5 Cluster: Chromosome 16 SCAF14974, whole genome
            shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 16
            SCAF14974, whole genome shotgun sequence - Tetraodon
            nigroviridis (Green puffer)
          Length = 3050

 Score = 36.7 bits (81), Expect = 0.29
 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
 Frame = -2

Query: 473  YDSRRGHATITD-----QDDDDVPPIQGFSDDEPLVIA 375
            Y+SR G A  +       DD+D P I GFSDD P+VIA
Sbjct: 3013 YNSRLGSAIFSSGDELGDDDEDAPMISGFSDDVPMVIA 3050


>UniRef50_Q92673 Cluster: Sortilin-related receptor precursor; n=36;
            Eumetazoa|Rep: Sortilin-related receptor precursor - Homo
            sapiens (Human)
          Length = 2214

 Score = 36.7 bits (81), Expect = 0.29
 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
 Frame = -2

Query: 473  YDSRRGHATITD-----QDDDDVPPIQGFSDDEPLVIA 375
            Y SR G A  +      +DD+D P I GFSDD P+VIA
Sbjct: 2177 YSSRLGSAIFSSGDDLGEDDEDAPMITGFSDDVPMVIA 2214


>UniRef50_A7RTI0 Cluster: Predicted protein; n=1; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 1128

 Score = 35.9 bits (79), Expect = 0.51
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = -2

Query: 437  QDDDDVPPIQGFSDDEPLVIA 375
            +D++D P IQGFSDDEPLV A
Sbjct: 1108 RDEEDEPLIQGFSDDEPLVTA 1128


>UniRef50_A5B414 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 549

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 373 QAITSGSSSEKPWIGGTSSSSWSVMVAC 456
           Q + +GSSSEK W+ G+  ++ S  VAC
Sbjct: 207 QVVPAGSSSEKSWLRGSEEAAGSHWVAC 234


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,354,060
Number of Sequences: 1657284
Number of extensions: 7336355
Number of successful extensions: 18079
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18065
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)